RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 DAGLAQ9Y4D2 1042 aa13.29□□□□□ -0.28
PVT1-209ENST00000520913 RBBP6Q7Z6E9 1792 aaKnown RBP13.29□□□□□ -0.28
PVT1-209ENST00000520913 PHIPQ8WWQ0 1821 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 PNMA6EA0A0J9YXQ4 647 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 VGLL4Q14135 290 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 DIXDC1Q155Q3 683 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 IFNL1Q8IU54 200 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.28
PVT1-209ENST00000520913 ZNF296Q8WUU4 475 aaPredicted RBP13.28□□□□□ -0.28
PVT1-209ENST00000520913 OPTNQ96CV9 577 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 XAGE2Q96GT9 111 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 CSADQ9Y600 493 aa13.28□□□□□ -0.28
PVT1-209ENST00000520913 GPR25O00155 361 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 GJA5P36382 358 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 TIMM10P62072 90 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 DCAF15Q66K64 600 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.27□□□□□ -0.29
PVT1-209ENST00000520913 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.29
PVT1-209ENST00000520913 ITPRIPQ8IWB1 547 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 FAM151AQ8WW52 585 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 RFX7Q2KHR2 1363 aa13.27□□□□□ -0.29
PVT1-209ENST00000520913 IGF2BP3O00425 579 aaKnown RBP eCLIP13.26□□□□□ -0.29
PVT1-209ENST00000520913 GAKO14976 1311 aa13.26□□□□□ -0.29
PVT1-209ENST00000520913 CENPFP49454 3210 aa13.26□□□□□ -0.29
PVT1-209ENST00000520913 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
PVT1-209ENST00000520913 G3BP1Q13283 466 aaKnown RBP eCLIP13.26□□□□□ -0.29
PVT1-209ENST00000520913 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
PVT1-209ENST00000520913 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
PVT1-209ENST00000520913 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
PVT1-209ENST00000520913 WRNIP1Q96S55 665 aa13.26□□□□□ -0.29
PVT1-209ENST00000520913 ZSWIM8A7E2V4 1837 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 FKTNO75072 461 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
PVT1-209ENST00000520913 PKN2Q16513 984 aaKnown RBP13.25□□□□□ -0.29
PVT1-209ENST00000520913 GORABQ5T7V8 394 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 CDC42EP5Q6NZY7 148 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 ABCF2Q9UG63 623 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 MGAMO43451 1857 aa13.25□□□□□ -0.29
PVT1-209ENST00000520913 MROH7-TTC4A0A0A0MT08 1334 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 MYH1P12882 1939 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
PVT1-209ENST00000520913 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 POLA2Q14181 598 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 SNCAIPQ9Y6H5 919 aa13.24□□□□□ -0.29
PVT1-209ENST00000520913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
PVT1-209ENST00000520913 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 RLBP1P12271 317 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 GTF2A2P52657 109 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 TCP10Q12799 353 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 NFIAQ12857 509 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
PVT1-209ENST00000520913 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 ERO1BQ86YB8 467 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 GPR108Q9NPR9 543 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 USP40Q9NVE5 1235 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 MYH7P12883 1935 aa13.23□□□□□ -0.29
PVT1-209ENST00000520913 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
PVT1-209ENST00000520913 CCL15-CCL14A0A0B4J2E2 113 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 ENTPD3O75355 529 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 UQCRFS1P1P0C7P4 283 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 BTDP43251 543 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 CRHR2Q13324 411 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 CCL15Q16663 113 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 SPATA5Q8NB90 893 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 ZKSCAN4Q969J2 545 aaPredicted RBP13.22□□□□□ -0.29
PVT1-209ENST00000520913 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
PVT1-209ENST00000520913 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 IDI2Q9BXS1 227 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 HMG20BQ9P0W2 317 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 NAV1Q8NEY1 1877 aa13.22□□□□□ -0.29
PVT1-209ENST00000520913 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
PVT1-209ENST00000520913 MS4A1P11836 297 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 MCAMP43121 646 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 RGS19P49795 217 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 RGS3P49796 1198 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 GSTO1P78417 241 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 MECOMQ03112 1051 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 PPIL2Q13356 520 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 TNNI3KQ59H18 835 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 FBXO46Q6PJ61 603 aaPredicted RBP13.21□□□□□ -0.29
PVT1-209ENST00000520913 PI16Q6UXB8 463 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 BRI3BPQ8WY22 251 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 ERO1AQ96HE7 468 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 PTPN18Q99952 460 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.29
PVT1-209ENST00000520913 DDX60LQ5H9U9 1706 aaKnown RBP13.2□□□□□ -0.3
PVT1-209ENST00000520913 MYH8P13535 1937 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms