RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 POLR3KQ9Y2Y1 108 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 M0R082 166 aa8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 STK10O94804 968 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 NOL8Q76FK4 1167 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 CCDC84Q86UT8 332 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 FAM169BQ8N8A8 192 aa8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 ZNF417Q8TAU3 575 aa8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 ZNF587Q96SQ5 575 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-202ENST00000517533 GSTP1P09211 210 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 HOXB4P17483 251 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 ALAS2P22557 587 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 GSTM4Q03013 218 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 CLCQ05315 142 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 CHSY3Q70JA7 882 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 GALNT11Q8NCW6 608 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 EDARADDQ8WWZ3 215 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 KLHDC7BQ96G42 594 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 PPME1Q9Y570 386 aa8.09□□□□□ -1.11
CTNNA1-202ENST00000517533 KLF4O43474 513 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 SERINC3Q13530 473 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 MPP2Q14168 576 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 ZNF787Q6DD87 383 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 GALNT6Q8NCL4 622 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 GPBAR1Q8TDU6 330 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 WHAMMQ8TF30 809 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 WDR89Q96FK6 387 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 BTBD6Q96KE9 485 aa8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 CCDC86Q9H6F5 360 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 SOX17Q9H6I2 414 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-202ENST00000517533 FSCN2O14926 492 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 DDX3YO15523 660 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 OIP5O43482 229 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 ZNF862O60290 1169 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 RAB11FIP3O75154 756 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 DLGAP3O95886 979 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 NID1P14543 1247 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 CABP4P57796 275 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 SETDB1Q15047 1291 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 EGFLAMQ63HQ2 1017 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 SDE2Q6IQ49 451 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 MICAL1Q8TDZ2 1067 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 HNRNPLLQ8WVV9 542 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 KCNK4Q9NYG8 393 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 SAMM50Q9Y512 469 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
CTNNA1-202ENST00000517533 LILRB5O75023 590 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 ADAM11O75078 769 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 TRIM37O94972 964 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 SLURP2P0DP57 97 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 MAOBP27338 520 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 PIP4K2BP78356 416 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 C19orf57Q0VDD7 668 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 COL9A2Q14055 689 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 INPP5AQ14642 412 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 LRRC14Q15048 493 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 LYPD4Q6UWN0 246 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 ANKS3Q6ZW76 656 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 KCNB2Q92953 911 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 SRRTQ9BXP5 876 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 OSBPL2Q9H1P3 480 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 ZSWIM4Q9H7M6 989 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 TBX22Q9Y458 520 aa8.06□□□□□ -1.12
CTNNA1-202ENST00000517533 GFRA2O00451 464 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 SMAD7O15105 426 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 DEAF1O75398 565 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 MCM4P33991 863 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 AP3B2Q13367 1082 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 GK5Q6ZS86 529 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 NLGN1Q8N2Q7 840 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 EMILIN2Q9BXX0 1053 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
CTNNA1-202ENST00000517533 GIPRP48546 466 aa8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 RPL6Q02878 288 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 LRFN4Q6PJG9 635 aa8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 WFDC8Q8IUA0 241 aa8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 DMRTC2Q8IXT2 367 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 STRIP2Q9ULQ0 834 aa8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 CORINQ9Y5Q5 1042 aa8.04□□□□□ -1.12
CTNNA1-202ENST00000517533 CELA2BP08218 269 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 LIG1P18858 919 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 LMNB1P20700 586 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 GMPRP36959 345 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 NLRP12P59046 1061 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 POU4F3Q15319 338 aa8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 FOXD4L6Q3SYB3 417 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 FOXD4L3Q6VB84 417 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-202ENST00000517533 FAM9AQ8IZU1 332 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms