RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 SNAPC2Q13487 334 aa18.19■□□□□ 0.5
SCARNA20.5-201ENST00000516991 ARMC5Q96C12 935 aa18.19■□□□□ 0.5
SCARNA20.5-201ENST00000516991 ZNF341Q9BYN7 854 aa18.19■□□□□ 0.5
SCARNA20.5-201ENST00000516991 SIL1Q9H173 461 aa18.19■□□□□ 0.5
SCARNA20.5-201ENST00000516991 KIAA0100Q14667 2235 aaKnown RBP18.18■□□□□ 0.5
SCARNA20.5-201ENST00000516991 ZBTB22O15209 634 aa18.18■□□□□ 0.5
SCARNA20.5-201ENST00000516991 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
SCARNA20.5-201ENST00000516991 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
SCARNA20.5-201ENST00000516991 DAGLAQ9Y4D2 1042 aa18.18■□□□□ 0.5
SCARNA20.5-201ENST00000516991 SALL1Q9NSC2 1324 aa18.18■□□□□ 0.5
SCARNA20.5-201ENST00000516991 LDHBP07195 334 aaKnown RBP18.17■□□□□ 0.5
SCARNA20.5-201ENST00000516991 FAM43AQ8N2R8 423 aa18.17■□□□□ 0.5
SCARNA20.5-201ENST00000516991 DENND2AQ9ULE3 1009 aa18.17■□□□□ 0.5
SCARNA20.5-201ENST00000516991 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
SCARNA20.5-201ENST00000516991 AK9Q5TCS8 1911 aa18.17■□□□□ 0.5
SCARNA20.5-201ENST00000516991 PRDX5P30044 214 aa18.16■□□□□ 0.5
SCARNA20.5-201ENST00000516991 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
SCARNA20.5-201ENST00000516991 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
SCARNA20.5-201ENST00000516991 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
SCARNA20.5-201ENST00000516991 IRF6O14896 467 aa18.15■□□□□ 0.5
SCARNA20.5-201ENST00000516991 PPATQ06203 517 aa18.15■□□□□ 0.5
SCARNA20.5-201ENST00000516991 KIF22Q14807 665 aa18.15■□□□□ 0.5
SCARNA20.5-201ENST00000516991 DIXDC1Q155Q3 683 aa18.15■□□□□ 0.5
SCARNA20.5-201ENST00000516991 CDC42EP5Q6NZY7 148 aa18.15■□□□□ 0.5
SCARNA20.5-201ENST00000516991 COPRSQ9NQ92 184 aa18.15■□□□□ 0.5
SCARNA20.5-201ENST00000516991 DOCK2Q92608 1830 aa18.14■□□□□ 0.5
SCARNA20.5-201ENST00000516991 BTBD19C9JJ37 291 aa18.14■□□□□ 0.49
SCARNA20.5-201ENST00000516991 TLR2O60603 784 aa18.14■□□□□ 0.49
SCARNA20.5-201ENST00000516991 PHKA1P46020 1223 aa18.14■□□□□ 0.49
SCARNA20.5-201ENST00000516991 PDS5AQ29RF7 1337 aaKnown RBP18.14■□□□□ 0.49
SCARNA20.5-201ENST00000516991 MYH2Q9UKX2 1941 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 POTEFA5A3E0 1075 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 GNRH1P01148 92 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 GNAI3P08754 354 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 INPP5BP32019 993 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 SLC9C1Q4G0N8 1177 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 MIGA2Q7L4E1 593 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 NBPF11Q86T75 865 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 MEIS3Q99687 375 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ZNF112Q9UJU3 913 aa18.13■□□□□ 0.49
SCARNA20.5-201ENST00000516991 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 RARSP54136 660 aaKnown RBP18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 CAP1Q01518 475 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 TCP10Q12799 353 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 NFIAQ12857 509 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 SLF2Q8IX21 1173 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ZNF333Q96JL9 665 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 TMEM106CQ9BVX2 250 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 USP40Q9NVE5 1235 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 KCNH4Q9UQ05 1017 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 PTCH2Q9Y6C5 1203 aa18.12■□□□□ 0.49
SCARNA20.5-201ENST00000516991 PRMT2P55345 433 aa18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 LACTBP83111 547 aaPredicted RBP18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 CCDC102BQ68D86 513 aa18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ANKRD23Q86SG2 305 aa18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 GCC1Q96CN9 775 aa18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 AKAP2Q9Y2D5 859 aa18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 GAKO14976 1311 aa18.11■□□□□ 0.49
SCARNA20.5-201ENST00000516991 RFX7Q2KHR2 1363 aa18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ENTPD3O75355 529 aa18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 MTX1Q13505 466 aa18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 SPTY2D1Q68D10 685 aaPredicted RBP18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 IDI2Q9BXS1 227 aa18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 PCDH10Q9P2E7 1040 aa18.1■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ADORA1P30542 326 aa18.09■□□□□ 0.49
SCARNA20.5-201ENST00000516991 RASGRF1Q13972 1273 aa18.09■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ATRNL1Q5VV63 1379 aa18.08■□□□□ 0.49
SCARNA20.5-201ENST00000516991 ZSWIM8A7E2V4 1837 aa18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 A0A1B0GUL7 405 aa18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SRGAP3O43295 1099 aa18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 RGS3P49796 1198 aa18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 FAM163AQ96GL9 167 aaPredicted RBP18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 CENPFP49454 3210 aa18.08■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ADGRA2Q96PE1 1338 aa18.07■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PDHXO00330 501 aa18.07■□□□□ 0.48
SCARNA20.5-201ENST00000516991 CXCL11O14625 94 aa18.07■□□□□ 0.48
SCARNA20.5-201ENST00000516991 C17orf99Q6UX52 265 aa18.07■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PARK7Q99497 189 aaKnown RBP18.07■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
SCARNA20.5-201ENST00000516991 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 DOCK1Q14185 1865 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 EN2P19622 333 aaPredicted RBP18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 TIMM10P62072 90 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SLC4A8Q2Y0W8 1093 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ZSCAN29Q8IWY8 852 aaPredicted RBP18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 SCYL3Q8IZE3 742 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 XAGE2Q96GT9 111 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 ARHGAP39Q9C0H5 1083 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 PICK1Q9NRD5 415 aa18.06■□□□□ 0.48
SCARNA20.5-201ENST00000516991 HOXD10P28358 340 aa18.05■□□□□ 0.48
SCARNA20.5-201ENST00000516991 TFCP2Q12800 502 aa18.05■□□□□ 0.48
SCARNA20.5-201ENST00000516991 CPA4Q9UI42 421 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms