RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 ECM29Q5VYK3 1845 aa13.74□□□□□ -0.21
SCARNA16.1-201ENST00000516133 USP2O75604 605 aaPredicted RBP13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 LDHCP07864 332 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 MCAMP43121 646 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 CACNB3P54284 484 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 CDC42EP5Q6NZY7 148 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 CLASRPQ8N2M8 674 aaKnown RBP13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 ZIC5Q96T25 663 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 CCDC8Q9H0W5 538 aaPredicted RBP13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 USP40Q9NVE5 1235 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 LRP2BPQ9P2M1 347 aa13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 DBNLQ9UJU6 430 aaKnown RBP13.73□□□□□ -0.21
SCARNA16.1-201ENST00000516133 GAKO14976 1311 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 MECOMQ03112 1051 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 PI16Q6UXB8 463 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 AACSQ86V21 672 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 FAM151AQ8WW52 585 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
SCARNA16.1-201ENST00000516133 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 LBX1P52954 281 aa13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 COL13A1Q5TAT6 717 aaPredicted RBP13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 ANKRD13AQ8IZ07 590 aa13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 NSUN4Q96CB9 384 aaKnown RBP13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 CSRNP1Q96S65 589 aa13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
SCARNA16.1-201ENST00000516133 GPR75-ASB3A0A0A6YYF3 556 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 APBB1O00213 710 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 INHBEP58166 350 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 SPRYD7Q5W111 196 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 IDI2Q9BXS1 227 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 IL1RAPL2Q9NP60 686 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MROH7-TTC4A0A0A0MT08 1334 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ENTPD3O75355 529 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 CYP2E1P05181 493 aaPredicted RBP13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 IFIT2P09913 472 aaKnown RBP13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZBTB48P10074 688 aaPredicted RBP13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 BTDP43251 543 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TM4SF4P48230 202 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MAP3K9P80192 1104 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TCP10Q12799 353 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 NFIAQ12857 509 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 SAGE1Q9NXZ1 904 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TLR7Q9NYK1 1049 aaKnown RBP13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 SSC5DA1L4H1 1573 aa13.69□□□□□ -0.22
SCARNA16.1-201ENST00000516133 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 BAG3O95817 575 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZAP70P43403 619 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 SREBF2Q12772 1141 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TMED8Q6PL24 325 aaPredicted RBP13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZNF384Q8TF68 577 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 CLMNQ96JQ2 1002 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 NOL10Q9BSC4 688 aaKnown RBP13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 RNF186Q9NXI6 227 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 FAM198AQ9UFP1 575 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 CSADQ9Y600 493 aa13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 WDHD1O75717 1129 aaPredicted RBP13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TRPA1O75762 1119 aa13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 RGS3P49796 1198 aa13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
SCARNA16.1-201ENST00000516133 PLCG2P16885 1265 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 RHBDL3P58872 404 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 PPP4CP60510 307 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 WNK4Q96J92 1243 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZNF341Q9BYN7 854 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 DCTPP1Q9H773 170 aa13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
SCARNA16.1-201ENST00000516133 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ALDH1A1P00352 501 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 AAMPQ13685 434 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 VGLL4Q14135 290 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ZFPM1Q8IX07 1006 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 BCL11AQ9H165 835 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 ELP3Q9H9T3 547 aa13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
SCARNA16.1-201ENST00000516133 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms