RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
BRIX1-205ENST00000515798 MAP3K5Q99683 1374 aa12.2□□□□□ -0.46
BRIX1-205ENST00000515798 TARSL2A2RTX5 802 aaKnown RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 NDUFAB1O14561 156 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 KIF5CO60282 957 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 IMPDH2P12268 514 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 ATP5JP18859 108 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 ADD1P35611 737 aaKnown RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 GGCXP38435 758 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 FMR1NBQ8N0W7 255 aaPredicted RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 MKL1Q969V6 931 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 OSBPL9Q96SU4 736 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 A0A087WWV3 80 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 ERICH2A1L162 156 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 CCDC175P0C221 793 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 NAP1L1P55209 391 aaKnown RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 CYB5D1Q6P9G0 228 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 RBM12BQ8IXT5 1001 aaKnown RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 HSD3B7Q9H2F3 369 aa12.19□□□□□ -0.46
BRIX1-205ENST00000515798 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.19□□□□□ -0.46
BRIX1-205ENST00000515798 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 DLG5Q8TDM6 1919 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 TET3O43151 1660 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 FRMD3A2A2Y4 597 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 CTAGE9A4FU28 777 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 FAM163BP0C2L3 166 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 USP14P54578 494 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 KCNB1Q14721 858 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 FSIP1Q8NA03 581 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 TPX2Q9ULW0 747 aaKnown RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 FRMPD1Q5SYB0 1578 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 A0A1W2PQ27 194 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 A0A1W2PQ64 194 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 A0A1W2PQD8 194 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 SKAP2O75563 359 aaPredicted RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 PSMA5P28066 241 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 CAPRIN2Q6IMN6 1127 aaKnown RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 MIS18BP1Q6P0N0 1132 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 FUKQ8N0W3 1084 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 SMARCC2Q8TAQ2 1214 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 CCDC47Q96A33 483 aaKnown RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 MMTAG2Q9BU76 263 aaKnown RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 EHD4Q9H223 541 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
BRIX1-205ENST00000515798 CORO1CQ9ULV4 474 aaPredicted RBP12.18□□□□□ -0.46
BRIX1-205ENST00000515798 KDM6AO15550 1401 aaPredicted RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 SMNDC1O75940 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 CDKL5O76039 1030 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 MAP4K4O95819 1239 aaPredicted RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 GNAI2P04899 355 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 PDHBP11177 359 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 CWF19L1Q69YN2 538 aaKnown RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 NCAPG2Q86XI2 1143 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 RUFY2Q8WXA3 655 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 MRPS27Q92552 414 aaKnown RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 DPF2Q92785 391 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 ZNF396Q96N95 335 aaPredicted RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 CENPHQ9H3R5 247 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
BRIX1-205ENST00000515798 KIF1BO60333 1816 aa12.17□□□□□ -0.46
BRIX1-205ENST00000515798 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 CCT4P50991 539 aaKnown RBP12.16□□□□□ -0.46
BRIX1-205ENST00000515798 SNX1Q13596 522 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 C6orf89Q6UWU4 347 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 NFXL1Q6ZNB6 911 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 TC2NQ8N9U0 490 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 RIN2Q8WYP3 895 aaPredicted RBP12.16□□□□□ -0.46
BRIX1-205ENST00000515798 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 EBF2Q9HAK2 575 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 BIN1O00499 593 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 OPA1O60313 960 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 SERPINC1P01008 464 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 ZKSCAN1P17029 563 aaPredicted RBP12.16□□□□□ -0.46
BRIX1-205ENST00000515798 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
BRIX1-205ENST00000515798 PEX19P40855 299 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 ATP8B2P98198 1209 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 NECTIN1Q15223 517 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 CFAP100Q494V2 611 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 TRIM58Q8NG06 486 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
BRIX1-205ENST00000515798 MYO1AQ9UBC5 1043 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
BRIX1-205ENST00000515798 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms