RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 TBC1D16Q8TBP0 767 aa14.13□□□□□ -0.15
LMNA-224ENST00000515711 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
LMNA-224ENST00000515711 ARMT1Q9H993 441 aa14.13□□□□□ -0.15
LMNA-224ENST00000515711 SMC3Q9UQE7 1217 aa14.13□□□□□ -0.15
LMNA-224ENST00000515711 BCS1LQ9Y276 419 aa14.13□□□□□ -0.15
LMNA-224ENST00000515711 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
LMNA-224ENST00000515711 H0YIN7 160 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 GOLGA6L22H0YM25 854 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 MCM5P33992 734 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 EXOSC10Q01780 885 aaKnown RBP14.12□□□□□ -0.15
LMNA-224ENST00000515711 Q6ZUG5 572 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 IFNL3Q8IZI9 196 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 LCORLQ8N3X6 602 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 TBC1D22AQ8WUA7 517 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 NSUN4Q96CB9 384 aaKnown RBP14.12□□□□□ -0.15
LMNA-224ENST00000515711 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 RRAGCQ9HB90 399 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 SLC4A4Q9Y6R1 1079 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 SLX4Q8IY92 1834 aa14.12□□□□□ -0.15
LMNA-224ENST00000515711 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
LMNA-224ENST00000515711 WTIPA6NIX2 430 aaPredicted RBP14.11□□□□□ -0.15
LMNA-224ENST00000515711 GSG1L2A8MUP6 293 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 LDHBP07195 334 aaKnown RBP14.11□□□□□ -0.15
LMNA-224ENST00000515711 MCM4P33991 863 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 TDO2P48775 406 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 HAND2P61296 217 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 MECOMQ03112 1051 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 ME3Q16798 604 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 C9orf131Q5VYM1 1079 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 TTLL5Q6EMB2 1281 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 TXNRD3Q86VQ6 643 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 C2CD5Q86YS7 1000 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 CCDC83Q8IWF9 413 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
LMNA-224ENST00000515711 CNKSR1Q969H4 720 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 EYA3Q99504 573 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 RIOK1Q9BRS2 568 aaKnown RBP14.11□□□□□ -0.15
LMNA-224ENST00000515711 COA1Q9GZY4 146 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 RNF41Q9H4P4 317 aaPredicted RBP14.11□□□□□ -0.15
LMNA-224ENST00000515711 EPB41L4AQ9HCS5 686 aaPredicted RBP14.11□□□□□ -0.15
LMNA-224ENST00000515711 CD209Q9NNX6 404 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 PSME4Q14997 1843 aa14.11□□□□□ -0.15
LMNA-224ENST00000515711 C6orf229H3BNL8 230 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 LARGE1O95461 756 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 LDHCP07864 332 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 PCP11498 1178 aaKnown RBP14.1□□□□□ -0.15
LMNA-224ENST00000515711 NT5C2P49902 561 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 MPNDQ8N594 471 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 MIGA1Q8NAN2 632 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 SMC1BQ8NDV3 1235 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 GTF3C6Q969F1 213 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 NOL10Q9BSC4 688 aaKnown RBP14.1□□□□□ -0.15
LMNA-224ENST00000515711 MTA3Q9BTC8 594 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
LMNA-224ENST00000515711 KRT23Q9C075 422 aa14.1□□□□□ -0.15
LMNA-224ENST00000515711 DDX60LQ5H9U9 1706 aaKnown RBP14.1□□□□□ -0.15
LMNA-224ENST00000515711 ZNF646O15015 1829 aaPredicted RBP14.09□□□□□ -0.15
LMNA-224ENST00000515711 BRD1O95696 1058 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 PDCP20941 246 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 GRIPAP1Q4V328 841 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
LMNA-224ENST00000515711 STAG1Q8WVM7 1258 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 BRF1Q92994 677 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 ZNF622Q969S3 477 aaKnown RBP eCLIP14.09□□□□□ -0.15
LMNA-224ENST00000515711 ZNF274Q96GC6 653 aaPredicted RBP14.09□□□□□ -0.15
LMNA-224ENST00000515711 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 TCEANC2Q96MN5 208 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 LLPHQ9BRT6 129 aaKnown RBP14.09□□□□□ -0.15
LMNA-224ENST00000515711 POLLQ9UGP5 575 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 SUGT1Q9Y2Z0 365 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 MYH15Q9Y2K3 1946 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 FAM205AQ6ZU69 1335 aa14.09□□□□□ -0.15
LMNA-224ENST00000515711 A0A0G2JLW4 131 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 PRC1O43663 620 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 PFKFB2O60825 505 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 PRDX5P30044 214 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 EVCP57679 992 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 TBC1D10CQ8IV04 446 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 ZC3H12CQ9C0D7 883 aaKnown RBP14.08□□□□□ -0.16
LMNA-224ENST00000515711 ATP8A2Q9NTI2 1148 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 ANAPC4Q9UJX5 808 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 KIF3AQ9Y496 699 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
LMNA-224ENST00000515711 FOXN1O15353 648 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 BAG3O95817 575 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 GJB2P29033 226 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 HMGN5P82970 282 aaKnown RBP14.07□□□□□ -0.16
LMNA-224ENST00000515711 ST3GAL1Q11201 340 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 ZNF384Q8TF68 577 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 ARPP21Q9UBL0 812 aaPredicted RBP14.07□□□□□ -0.16
LMNA-224ENST00000515711 ATP6V1DQ9Y5K8 247 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 MROH7-TTC4A0A0A0MT08 1334 aa14.07□□□□□ -0.16
LMNA-224ENST00000515711 MYH1P12882 1939 aa14.06□□□□□ -0.16
LMNA-224ENST00000515711 DHX16O60231 1041 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms