RNA–Protein interactions for RNA: ENST00000515636.1

NEK11-216, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-216ENST00000515636 CDC42EP5Q6NZY7 148 aa14.04□□□□□ -0.16
NEK11-216ENST00000515636 SIRT2Q8IXJ6 389 aa14.04□□□□□ -0.16
NEK11-216ENST00000515636 RPAP2Q8IXW5 612 aaPredicted RBP14.04□□□□□ -0.16
NEK11-216ENST00000515636 SPATA5Q8NB90 893 aa14.04□□□□□ -0.16
NEK11-216ENST00000515636 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
NEK11-216ENST00000515636 TLR7Q9NYK1 1049 aaKnown RBP14.04□□□□□ -0.16
NEK11-216ENST00000515636 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
NEK11-216ENST00000515636 SPTY2D1Q68D10 685 aaPredicted RBP14.03□□□□□ -0.16
NEK11-216ENST00000515636 ERC1Q8IUD2 1116 aa14.03□□□□□ -0.16
NEK11-216ENST00000515636 ZNF384Q8TF68 577 aa14.03□□□□□ -0.16
NEK11-216ENST00000515636 EAF2Q96CJ1 260 aaPredicted RBP14.03□□□□□ -0.16
NEK11-216ENST00000515636 CLMNQ96JQ2 1002 aa14.03□□□□□ -0.16
NEK11-216ENST00000515636 MROH7-TTC4A0A0A0MT08 1334 aa14.03□□□□□ -0.16
NEK11-216ENST00000515636 FOCADQ5VW36 1801 aa14.03□□□□□ -0.16
NEK11-216ENST00000515636 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
NEK11-216ENST00000515636 AK9Q5TCS8 1911 aa14.02□□□□□ -0.16
NEK11-216ENST00000515636 UNCXA6NJT0 531 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 HMMRO75330 724 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.17
NEK11-216ENST00000515636 IREB2P48200 963 aaKnown RBP14.02□□□□□ -0.17
NEK11-216ENST00000515636 MECOMQ03112 1051 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 NFIAQ12857 509 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 TTC39AQ5SRH9 613 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.17
NEK11-216ENST00000515636 ZNF512BQ96KM6 892 aaPredicted RBP14.02□□□□□ -0.17
NEK11-216ENST00000515636 YTHDC1Q96MU7 727 aaKnown RBP14.02□□□□□ -0.17
NEK11-216ENST00000515636 CSRNP1Q96S65 589 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 SAGE1Q9NXZ1 904 aa14.02□□□□□ -0.17
NEK11-216ENST00000515636 MKRN3Q13064 507 aaKnown RBP14.01□□□□□ -0.17
NEK11-216ENST00000515636 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
NEK11-216ENST00000515636 SPRYD7Q5W111 196 aa14.01□□□□□ -0.17
NEK11-216ENST00000515636 TBC1D9Q6ZT07 1266 aa14.01□□□□□ -0.17
NEK11-216ENST00000515636 SLF2Q8IX21 1173 aa14.01□□□□□ -0.17
NEK11-216ENST00000515636 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
NEK11-216ENST00000515636 TNS4Q8IZW8 715 aa14.01□□□□□ -0.17
NEK11-216ENST00000515636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.01□□□□□ -0.17
NEK11-216ENST00000515636 FAM163AQ96GL9 167 aaPredicted RBP14.01□□□□□ -0.17
NEK11-216ENST00000515636 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
NEK11-216ENST00000515636 ZBTB48P10074 688 aaPredicted RBP14□□□□□ -0.17
NEK11-216ENST00000515636 RHPN1Q8TCX5 695 aa14□□□□□ -0.17
NEK11-216ENST00000515636 FAM151AQ8WW52 585 aa14□□□□□ -0.17
NEK11-216ENST00000515636 NSUN4Q96CB9 384 aaKnown RBP14□□□□□ -0.17
NEK11-216ENST00000515636 WNK4Q96J92 1243 aa14□□□□□ -0.17
NEK11-216ENST00000515636 CCDC8Q9H0W5 538 aaPredicted RBP14□□□□□ -0.17
NEK11-216ENST00000515636 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
NEK11-216ENST00000515636 SNRKQ9NRH2 765 aa14□□□□□ -0.17
NEK11-216ENST00000515636 USP40Q9NVE5 1235 aa14□□□□□ -0.17
NEK11-216ENST00000515636 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
NEK11-216ENST00000515636 ATRNL1Q5VV63 1379 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 WDHD1O75717 1129 aaPredicted RBP13.99□□□□□ -0.17
NEK11-216ENST00000515636 CYP2E1P05181 493 aaPredicted RBP13.99□□□□□ -0.17
NEK11-216ENST00000515636 BTDP43251 543 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
NEK11-216ENST00000515636 TCP10Q12799 353 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 VGLL4Q14135 290 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.99□□□□□ -0.17
NEK11-216ENST00000515636 AACSQ86V21 672 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 KIF1BPQ96EK5 621 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 SLC10A4Q96EP9 437 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 IDI2Q9BXS1 227 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 RNF186Q9NXI6 227 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 RAI14Q9P0K7 980 aa13.99□□□□□ -0.17
NEK11-216ENST00000515636 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 TRPA1O75762 1119 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 GJA5P36382 358 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 ZAP70P43403 619 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 TM4SF4P48230 202 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 RHBDL3P58872 404 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 GSTO1P78417 241 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 SREBF2Q12772 1141 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 LRP2BPQ9P2M1 347 aa13.98□□□□□ -0.17
NEK11-216ENST00000515636 COL2A1P02458 1487 aaPredicted RBP13.98□□□□□ -0.17
NEK11-216ENST00000515636 DOCK1Q14185 1865 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 SIPA1L1O43166 1804 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 APBB1O00213 710 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 RGS3P49796 1198 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 DCAF15Q66K64 600 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 OPTNQ96CV9 577 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 WRNIP1Q96S55 665 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 DDX4Q9NQI0 724 aaKnown RBP13.97□□□□□ -0.17
NEK11-216ENST00000515636 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.97□□□□□ -0.17
NEK11-216ENST00000515636 CSADQ9Y600 493 aa13.97□□□□□ -0.17
NEK11-216ENST00000515636 DDX60LQ5H9U9 1706 aaKnown RBP13.96□□□□□ -0.17
NEK11-216ENST00000515636 MANSC4A6NHS7 340 aaPredicted RBP13.96□□□□□ -0.17
NEK11-216ENST00000515636 RAB11FIP3O75154 756 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 ENTPD3O75355 529 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 LDHCP07864 332 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 MIGA2Q7L4E1 593 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 CLASRPQ8N2M8 674 aaKnown RBP13.96□□□□□ -0.17
NEK11-216ENST00000515636 ZNF341Q9BYN7 854 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
NEK11-216ENST00000515636 SNCAIPQ9Y6H5 919 aa13.96□□□□□ -0.17
NEK11-216ENST00000515636 ATAD5Q96QE3 1844 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms