RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 CDC42EP5Q6NZY7 148 aa18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 PI16Q6UXB8 463 aa18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 ZNF384Q8TF68 577 aa18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 CLMNQ96JQ2 1002 aa18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 ZNF512BQ96KM6 892 aaPredicted RBP18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 DBNDD2Q9BQY9 259 aa18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 TSKSQ9UJT2 592 aa18.25■□□□□ 0.51
HMGCLL1-209ENST00000515546 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 SIRT2Q8IXJ6 389 aa18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 RNF186Q9NXI6 227 aa18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 MAST2Q6P0Q8 1798 aa18.24■□□□□ 0.51
HMGCLL1-209ENST00000515546 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
HMGCLL1-209ENST00000515546 ANKRD13AQ8IZ07 590 aa18.23■□□□□ 0.51
HMGCLL1-209ENST00000515546 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
HMGCLL1-209ENST00000515546 FAM151AQ8WW52 585 aa18.23■□□□□ 0.51
HMGCLL1-209ENST00000515546 EXOC6BQ9Y2D4 811 aa18.23■□□□□ 0.51
HMGCLL1-209ENST00000515546 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
HMGCLL1-209ENST00000515546 AKAP11Q9UKA4 1901 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 TM4SF4P48230 202 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 MECOMQ03112 1051 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 NFIAQ12857 509 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 EAF2Q96CJ1 260 aaPredicted RBP18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 TLR7Q9NYK1 1049 aaKnown RBP18.22■□□□□ 0.51
HMGCLL1-209ENST00000515546 SREBF2Q12772 1141 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 HSP90AB4PQ58FF6 505 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 NSUN4Q96CB9 384 aaKnown RBP18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 HOOK2Q96ED9 719 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 SLC10A4Q96EP9 437 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 IDI2Q9BXS1 227 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 FAM198AQ9UFP1 575 aa18.21■□□□□ 0.51
HMGCLL1-209ENST00000515546 ATRNL1Q5VV63 1379 aa18.2■□□□□ 0.5
HMGCLL1-209ENST00000515546 HMMRO75330 724 aa18.2■□□□□ 0.5
HMGCLL1-209ENST00000515546 MKRN3Q13064 507 aaKnown RBP18.2■□□□□ 0.5
HMGCLL1-209ENST00000515546 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
HMGCLL1-209ENST00000515546 GPR75-ASB3A0A0A6YYF3 556 aa18.19■□□□□ 0.5
HMGCLL1-209ENST00000515546 TRPA1O75762 1119 aa18.19■□□□□ 0.5
HMGCLL1-209ENST00000515546 GJA5P36382 358 aa18.19■□□□□ 0.5
HMGCLL1-209ENST00000515546 BTDP43251 543 aa18.19■□□□□ 0.5
HMGCLL1-209ENST00000515546 VGLL4Q14135 290 aa18.19■□□□□ 0.5
HMGCLL1-209ENST00000515546 MANSC4A6NHS7 340 aaPredicted RBP18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 IGSF3O75054 1194 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 ENTPD3O75355 529 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 WDHD1O75717 1129 aaPredicted RBP18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 RHBDL3P58872 404 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 GSTO1P78417 241 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 MAP3K9P80192 1104 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 DCAF15Q66K64 600 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 CFHR5Q9BXR6 569 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
HMGCLL1-209ENST00000515546 DOCK2Q92608 1830 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 MAP4K4O95819 1239 aaPredicted RBP18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 RGS3P49796 1198 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 TCP10Q12799 353 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 AACSQ86V21 672 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 RAI14Q9P0K7 980 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 SNCAIPQ9Y6H5 919 aa18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 COL2A1P02458 1487 aaPredicted RBP18.17■□□□□ 0.5
HMGCLL1-209ENST00000515546 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 LDHCP07864 332 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 ZAP70P43403 619 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 INHBEP58166 350 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 ZFPM1Q8IX07 1006 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 OPTNQ96CV9 577 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 WRNIP1Q96S55 665 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 ZNF341Q9BYN7 854 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 DDX4Q9NQI0 724 aaKnown RBP18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 LRP2BPQ9P2M1 347 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 CSADQ9Y600 493 aa18.16■□□□□ 0.5
HMGCLL1-209ENST00000515546 TESPA1A2RU30 521 aaPredicted RBP18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 SPDYE5A6NIY4 337 aa18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 RAB11FIP3O75154 756 aa18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 IL1RAPL2Q9NP60 686 aa18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 PIH1D3Q9NQM4 214 aaKnown RBP18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
HMGCLL1-209ENST00000515546 IGF2BP3O00425 579 aaKnown RBP eCLIP18.14■□□□□ 0.49
HMGCLL1-209ENST00000515546 IFNL1Q8IU54 200 aa18.14■□□□□ 0.49
HMGCLL1-209ENST00000515546 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
HMGCLL1-209ENST00000515546 ALDH1A1P00352 501 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms