RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 EAF2Q96CJ1 260 aaPredicted RBP15.68■□□□□ 0.1
CLCN3-210ENST00000515420 BEGAINQ9BUH8 593 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 ABCF2Q9UG63 623 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 DBNLQ9UJU6 430 aaKnown RBP15.68■□□□□ 0.1
CLCN3-210ENST00000515420 TCP10L2B9ZVM9 353 aa15.67■□□□□ 0.1
CLCN3-210ENST00000515420 NBPF12Q5TAG4 269 aaPredicted RBP15.67■□□□□ 0.1
CLCN3-210ENST00000515420 RASAL3Q86YV0 1011 aa15.67■□□□□ 0.1
CLCN3-210ENST00000515420 HOOK2Q96ED9 719 aa15.67■□□□□ 0.1
CLCN3-210ENST00000515420 TEPSINQ96N21 525 aa15.67■□□□□ 0.1
CLCN3-210ENST00000515420 OTOFQ9HC10 1997 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 UBE2Q2LH0YL09 131 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 FOXN1O15353 648 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 MAP4K4O95819 1239 aaPredicted RBP15.66■□□□□ 0.1
CLCN3-210ENST00000515420 IREB2P48200 963 aaKnown RBP15.66■□□□□ 0.1
CLCN3-210ENST00000515420 CTCFP49711 727 aaPredicted RBP15.66■□□□□ 0.1
CLCN3-210ENST00000515420 GSTO1P78417 241 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 CDC42EP5Q6NZY7 148 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 PI16Q6UXB8 463 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 MOB2Q70IA6 237 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 CLASRPQ8N2M8 674 aaKnown RBP15.66■□□□□ 0.1
CLCN3-210ENST00000515420 TMEM39BQ9GZU3 492 aa15.66■□□□□ 0.1
CLCN3-210ENST00000515420 ANGEL1Q9UNK9 670 aaKnown RBP15.66■□□□□ 0.1
CLCN3-210ENST00000515420 LDHCP07864 332 aa15.65■□□□□ 0.1
CLCN3-210ENST00000515420 MECOMQ03112 1051 aa15.65■□□□□ 0.1
CLCN3-210ENST00000515420 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
CLCN3-210ENST00000515420 AACSQ86V21 672 aa15.65■□□□□ 0.1
CLCN3-210ENST00000515420 NSUN4Q96CB9 384 aaKnown RBP15.65■□□□□ 0.1
CLCN3-210ENST00000515420 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
CLCN3-210ENST00000515420 TLR7Q9NYK1 1049 aaKnown RBP15.65■□□□□ 0.1
CLCN3-210ENST00000515420 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
CLCN3-210ENST00000515420 RFX7Q2KHR2 1363 aa15.64■□□□□ 0.09
CLCN3-210ENST00000515420 DOCK2Q92608 1830 aa15.64■□□□□ 0.09
CLCN3-210ENST00000515420 CACNB3P54284 484 aa15.64■□□□□ 0.09
CLCN3-210ENST00000515420 TMED8Q6PL24 325 aaPredicted RBP15.64■□□□□ 0.09
CLCN3-210ENST00000515420 FAM151AQ8WW52 585 aa15.64■□□□□ 0.09
CLCN3-210ENST00000515420 IDI2Q9BXS1 227 aa15.64■□□□□ 0.09
CLCN3-210ENST00000515420 PRDM10Q9NQV6 1147 aa15.64■□□□□ 0.09
CLCN3-210ENST00000515420 MYO5AQ9Y4I1 1855 aaKnown RBP15.63■□□□□ 0.09
CLCN3-210ENST00000515420 AK9Q5TCS8 1911 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 GPR75-ASB3A0A0A6YYF3 556 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 USP2O75604 605 aaPredicted RBP15.63■□□□□ 0.09
CLCN3-210ENST00000515420 KIF23Q02241 960 aaPredicted RBP15.63■□□□□ 0.09
CLCN3-210ENST00000515420 PRKG1Q13976 671 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 ANKRD13AQ8IZ07 590 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 ZIC5Q96T25 663 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 IL1RAPL2Q9NP60 686 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 USP40Q9NVE5 1235 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 RAI14Q9P0K7 980 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 LRP2BPQ9P2M1 347 aa15.63■□□□□ 0.09
CLCN3-210ENST00000515420 ENTPD3O75355 529 aa15.62■□□□□ 0.09
CLCN3-210ENST00000515420 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
CLCN3-210ENST00000515420 CYP2E1P05181 493 aaPredicted RBP15.62■□□□□ 0.09
CLCN3-210ENST00000515420 ZBTB48P10074 688 aaPredicted RBP15.62■□□□□ 0.09
CLCN3-210ENST00000515420 BTDP43251 543 aa15.62■□□□□ 0.09
CLCN3-210ENST00000515420 DCAF15Q66K64 600 aa15.62■□□□□ 0.09
CLCN3-210ENST00000515420 TBC1D9Q6ZT07 1266 aa15.62■□□□□ 0.09
CLCN3-210ENST00000515420 ZNF384Q8TF68 577 aa15.62■□□□□ 0.09
CLCN3-210ENST00000515420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLCN3-210ENST00000515420 SAGE1Q9NXZ1 904 aa15.62■□□□□ 0.09
CLCN3-210ENST00000515420 COL2A1P02458 1487 aaPredicted RBP15.61■□□□□ 0.09
CLCN3-210ENST00000515420 IFIT2P09913 472 aaKnown RBP15.61■□□□□ 0.09
CLCN3-210ENST00000515420 HSPA8P11142 646 aaKnown RBP15.61■□□□□ 0.09
CLCN3-210ENST00000515420 ZAP70P43403 619 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 AAMPQ13685 434 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 SPRYD7Q5W111 196 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 SLC10A4Q96EP9 437 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 CSRNP1Q96S65 589 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 SNRKQ9NRH2 765 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 FAM198AQ9UFP1 575 aa15.61■□□□□ 0.09
CLCN3-210ENST00000515420 SREBF2Q12772 1141 aa15.6■□□□□ 0.09
CLCN3-210ENST00000515420 NFIAQ12857 509 aa15.6■□□□□ 0.09
CLCN3-210ENST00000515420 CDAN1Q8IWY9 1227 aa15.6■□□□□ 0.09
CLCN3-210ENST00000515420 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLCN3-210ENST00000515420 DCTPP1Q9H773 170 aa15.6■□□□□ 0.09
CLCN3-210ENST00000515420 FZD1Q9UP38 647 aa15.6■□□□□ 0.09
CLCN3-210ENST00000515420 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 APBB1O00213 710 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 WDHD1O75717 1129 aaPredicted RBP15.59■□□□□ 0.09
CLCN3-210ENST00000515420 PLCG2P16885 1265 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 TM4SF4P48230 202 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 RGS3P49796 1198 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 RHBDL3P58872 404 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 MAP3K9P80192 1104 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 TTF1Q15361 905 aaPredicted RBP15.59■□□□□ 0.09
CLCN3-210ENST00000515420 NAA16Q6N069 864 aaPredicted RBP15.59■□□□□ 0.09
CLCN3-210ENST00000515420 CERS3Q8IU89 383 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 NOL10Q9BSC4 688 aaKnown RBP15.59■□□□□ 0.09
CLCN3-210ENST00000515420 CDK5RAP2Q96SN8 1893 aa15.59■□□□□ 0.09
CLCN3-210ENST00000515420 BAG3O95817 575 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 LBX1P52954 281 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 INHBEP58166 350 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 PPP4CP60510 307 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 TCP10Q12799 353 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.58■□□□□ 0.08
CLCN3-210ENST00000515420 WNK4Q96J92 1243 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 CLMNQ96JQ2 1002 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 ZNF341Q9BYN7 854 aa15.58■□□□□ 0.08
CLCN3-210ENST00000515420 PIH1D3Q9NQM4 214 aaKnown RBP15.58■□□□□ 0.08
CLCN3-210ENST00000515420 CSADQ9Y600 493 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms