RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
SGCA-211ENST00000514934 NFIAQ12857 509 aa18.17■□□□□ 0.5
SGCA-211ENST00000514934 NOM1Q5C9Z4 860 aaKnown RBP18.17■□□□□ 0.5
SGCA-211ENST00000514934 CDC42EP5Q6NZY7 148 aa18.17■□□□□ 0.5
SGCA-211ENST00000514934 DOCK1Q14185 1865 aa18.17■□□□□ 0.5
SGCA-211ENST00000514934 TESPA1A2RU30 521 aaPredicted RBP18.16■□□□□ 0.5
SGCA-211ENST00000514934 IGF2BP3O00425 579 aaKnown RBP eCLIP18.16■□□□□ 0.5
SGCA-211ENST00000514934 PI16Q6UXB8 463 aa18.16■□□□□ 0.5
SGCA-211ENST00000514934 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
SGCA-211ENST00000514934 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
SGCA-211ENST00000514934 FAM198AQ9UFP1 575 aa18.16■□□□□ 0.5
SGCA-211ENST00000514934 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
SGCA-211ENST00000514934 BRCA2P51587 3418 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
SGCA-211ENST00000514934 ARID4AP29374 1257 aaPredicted RBP18.15■□□□□ 0.5
SGCA-211ENST00000514934 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
SGCA-211ENST00000514934 VGLL4Q14135 290 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 ANKRD13AQ8IZ07 590 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 PANK1Q8TE04 598 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 SLC10A4Q96EP9 437 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 MS4A4AQ96JQ5 239 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 PTPN18Q99952 460 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 HMG20BQ9P0W2 317 aa18.15■□□□□ 0.5
SGCA-211ENST00000514934 TNNI2P48788 182 aa18.14■□□□□ 0.49
SGCA-211ENST00000514934 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
SGCA-211ENST00000514934 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
SGCA-211ENST00000514934 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
SGCA-211ENST00000514934 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
SGCA-211ENST00000514934 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
SGCA-211ENST00000514934 MCAMP43121 646 aa18.13■□□□□ 0.49
SGCA-211ENST00000514934 SREBF2Q12772 1141 aa18.13■□□□□ 0.49
SGCA-211ENST00000514934 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
SGCA-211ENST00000514934 CEP85Q6P2H3 762 aa18.13■□□□□ 0.49
SGCA-211ENST00000514934 IFNL1Q8IU54 200 aa18.13■□□□□ 0.49
SGCA-211ENST00000514934 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
SGCA-211ENST00000514934 ELP3Q9H9T3 547 aa18.13■□□□□ 0.49
SGCA-211ENST00000514934 GPR108Q9NPR9 543 aa18.13■□□□□ 0.49
SGCA-211ENST00000514934 DGKZQ13574 1117 aa18.12■□□□□ 0.49
SGCA-211ENST00000514934 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
SGCA-211ENST00000514934 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
SGCA-211ENST00000514934 OPTNQ96CV9 577 aa18.12■□□□□ 0.49
SGCA-211ENST00000514934 GPR25O00155 361 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 WDHD1O75717 1129 aaPredicted RBP18.11■□□□□ 0.49
SGCA-211ENST00000514934 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 CAP1Q01518 475 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 TNNI3KQ59H18 835 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 SH3BP5LQ7L8J4 393 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
SGCA-211ENST00000514934 IDI2Q9BXS1 227 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 ZNF112Q9UJU3 913 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 FPGT-TNNI3KV9GXZ4 949 aa18.11■□□□□ 0.49
SGCA-211ENST00000514934 RBBP6Q7Z6E9 1792 aaKnown RBP18.11■□□□□ 0.49
SGCA-211ENST00000514934 MYH1P12882 1939 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 INHBEP58166 350 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 RHBDL3P58872 404 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 MECOMQ03112 1051 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
SGCA-211ENST00000514934 ZGPATQ8N5A5 531 aaKnown RBP18.1■□□□□ 0.49
SGCA-211ENST00000514934 SPATA5Q8NB90 893 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 DDX4Q9NQI0 724 aaKnown RBP18.1■□□□□ 0.49
SGCA-211ENST00000514934 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
SGCA-211ENST00000514934 PDE4DIPQ5VU43 2346 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 MYH7P12883 1935 aa18.1■□□□□ 0.49
SGCA-211ENST00000514934 MGAMO43451 1857 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 DDX60LQ5H9U9 1706 aaKnown RBP18.09■□□□□ 0.49
SGCA-211ENST00000514934 MROH7-TTC4A0A0A0MT08 1334 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 TBC1D9Q6ZT07 1266 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
SGCA-211ENST00000514934 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 DBNDD2Q9BQY9 259 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 USP40Q9NVE5 1235 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 TMOD2Q9NZR1 351 aa18.09■□□□□ 0.49
SGCA-211ENST00000514934 GPR75-ASB3A0A0A6YYF3 556 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 INPP5BP32019 993 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 RGS19P49795 217 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 MAP3K10Q02779 954 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 TCP10Q12799 353 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 CTU1Q7Z7A3 348 aaKnown RBP18.08■□□□□ 0.48
SGCA-211ENST00000514934 SIRT2Q8IXJ6 389 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 ZKSCAN4Q969J2 545 aaPredicted RBP18.08■□□□□ 0.48
SGCA-211ENST00000514934 WRNIP1Q96S55 665 aa18.08■□□□□ 0.48
SGCA-211ENST00000514934 TLR7Q9NYK1 1049 aaKnown RBP18.08■□□□□ 0.48
SGCA-211ENST00000514934 DBNLQ9UJU6 430 aaKnown RBP18.08■□□□□ 0.48
SGCA-211ENST00000514934 COL2A1P02458 1487 aaPredicted RBP18.07■□□□□ 0.48
SGCA-211ENST00000514934 KIAA0100Q14667 2235 aaKnown RBP18.07■□□□□ 0.48
SGCA-211ENST00000514934 LOC285556D6RIA3 1793 aa18.07■□□□□ 0.48
SGCA-211ENST00000514934 PHF20L1A8MW92 1017 aa18.07■□□□□ 0.48
SGCA-211ENST00000514934 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
SGCA-211ENST00000514934 SLURP2P0DP57 97 aa18.07■□□□□ 0.48
SGCA-211ENST00000514934 RGS3P49796 1198 aa18.07■□□□□ 0.48
SGCA-211ENST00000514934 MIGA2Q7L4E1 593 aa18.07■□□□□ 0.48
SGCA-211ENST00000514934 EAF2Q96CJ1 260 aaPredicted RBP18.07■□□□□ 0.48
SGCA-211ENST00000514934 ZNF512BQ96KM6 892 aaPredicted RBP18.07■□□□□ 0.48
SGCA-211ENST00000514934 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
SGCA-211ENST00000514934 ENTPD3O75355 529 aa18.06■□□□□ 0.48
SGCA-211ENST00000514934 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
SGCA-211ENST00000514934 CRHR2Q13324 411 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms