RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 CLCQ05315 142 aa10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 SYT9Q86SS6 491 aa10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 DDX54Q8TDD1 881 aaKnown RBP10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 APPBP2Q92624 585 aa10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 TNFRSF25Q93038 417 aa10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 DNAJC7Q99615 494 aa10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 TRIM37O94972 964 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 ARSHQ5FYA8 562 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 FBXW10Q5XX13 1052 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 GK5Q6ZS86 529 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 LILRB2Q8N423 598 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 STK35Q8TDR2 534 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 SLKQ9H2G2 1235 aaPredicted RBP10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 TMEM260Q9NX78 707 aa10.96□□□□□ -0.65
LDHBP3-201ENST00000514909 CCDC85CA6NKD9 419 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 ESRRAP11474 423 aaPredicted RBP10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 AP3B2Q13367 1082 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 CACTIN-AS1Q8N1I8 211 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 SPC25Q9HBM1 224 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 FANCLQ9NW38 375 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 CACNA2D2Q9NY47 1150 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 FRRS1LQ9P0K9 344 aa10.95□□□□□ -0.66
LDHBP3-201ENST00000514909 DNAJC6O75061 913 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 CTBSQ01459 385 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 KANK3Q6NY19 840 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 FOXR1Q6PIV2 292 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 FILIP1Q7Z7B0 1213 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 KIAA0907Q7Z7F0 614 aaPredicted RBP10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 PDZD3Q86UT5 571 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 MICALL1Q8N3F8 863 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 JMYQ8N9B5 988 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 IFT57Q9NWB7 429 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 SLC6A14Q9UN76 642 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 COL4A3BPQ9Y5P4 624 aa10.94□□□□□ -0.66
LDHBP3-201ENST00000514909 MEIS3P2A8K0S8 358 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 ANAPC15P60006 121 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 FAM35AQ86V20 835 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 GRIN3AQ8TCU5 1115 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 TTC9Q92623 222 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 ZNF669Q96BR6 464 aaPredicted RBP10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 SOX17Q9H6I2 414 aaPredicted RBP10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 CBX8Q9HC52 389 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 PCDHB14Q9Y5E9 798 aa10.93□□□□□ -0.66
LDHBP3-201ENST00000514909 PRR36Q9H6K5 1346 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 PPP1R12AO14974 1030 aaPredicted RBP10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 RAB11FIP3O75154 756 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 LRRFIP1Q32MZ4 808 aaKnown RBP10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 PERM1Q5SV97 790 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 ADAMTSL4Q6UY14 1074 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 TNKS2Q9H2K2 1166 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 IGFLR1Q9H665 355 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 METTL14Q9HCE5 456 aaKnown RBP10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 ST7Q9NRC1 585 aa10.92□□□□□ -0.66
LDHBP3-201ENST00000514909 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 CPB1P15086 417 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 C2orf27AQ580R0 203 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 TAF7LQ5H9L4 462 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 TAB3Q8N5C8 712 aaPredicted RBP10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 THAP3Q8WTV1 239 aaPredicted RBP10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 TM9SF2Q99805 663 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 KANSL2Q9H9L4 492 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 PCDH12Q9NPG4 1184 aa10.91□□□□□ -0.66
LDHBP3-201ENST00000514909 ESYT3A0FGR9 886 aa10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 GSTP1P09211 210 aaKnown RBP10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 IKBKEQ14164 716 aa10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 LARP1BQ659C4 914 aaKnown RBP10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 ST13P5Q8NFI4 369 aaPredicted RBP10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 MDFIQ99750 246 aa10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 LPIN3Q9BQK8 851 aa10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 NAGPAQ9UK23 515 aa10.9□□□□□ -0.66
LDHBP3-201ENST00000514909 CABP4P57796 275 aa10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 PTPN11Q06124 597 aaPredicted RBP10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 TBC1D8BQ0IIM8 1120 aa10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 ELMSAN1Q6PJG2 1045 aa10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 C16orf86Q6ZW13 317 aa10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 SMG9Q9H0W8 520 aaKnown RBP10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 TRIM33Q9UPN9 1127 aa10.89□□□□□ -0.67
LDHBP3-201ENST00000514909 FAM181BA6NEQ2 426 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 H3BRJ5 948 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 GJB6O95452 261 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 VSIG8P0DPA2 414 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 CDC27P30260 824 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 SQSTM1Q13501 440 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 MTERF2Q49AM1 385 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 SYNPOQ8N3V7 929 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 MICAL1Q8TDZ2 1067 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 FEZ1Q99689 392 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 SLC12A7Q9Y666 1083 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
LDHBP3-201ENST00000514909 A0A1W2PQH9 124 aa10.87□□□□□ -0.67
LDHBP3-201ENST00000514909 C2CD2LO14523 706 aa10.87□□□□□ -0.67
LDHBP3-201ENST00000514909 BMP4P12644 408 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms