RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 SPATA5Q8NB90 893 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
SMAD1-213ENST00000514778 KCNQ5Q9NR82 932 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 ECHDC1Q9NTX5 307 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 HMG20BQ9P0W2 317 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 CNOT7Q9UIV1 285 aaKnown RBP8.66□□□□□ -1.02
SMAD1-213ENST00000514778 SERPINA10Q9UK55 444 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 SCN4AP35499 1836 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 PSME4Q14997 1843 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 POTECB2RU33 542 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 APBB1O00213 710 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 ERC2O15083 957 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 EPHX2P34913 555 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 RASGRF1Q13972 1273 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 TTF1Q15361 905 aaPredicted RBP8.65□□□□□ -1.02
SMAD1-213ENST00000514778 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 CENPQQ7L2Z9 268 aaPredicted RBP8.65□□□□□ -1.02
SMAD1-213ENST00000514778 CHD1LQ86WJ1 897 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 SLF2Q8IX21 1173 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
SMAD1-213ENST00000514778 TAF1DQ9H5J8 278 aaPredicted RBP8.65□□□□□ -1.02
SMAD1-213ENST00000514778 RRAGCQ9HB90 399 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 PGAP2Q9UHJ9 254 aa8.65□□□□□ -1.02
SMAD1-213ENST00000514778 AOX1Q06278 1338 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 TBC1D12O60347 775 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-213ENST00000514778 LDHBP07195 334 aaKnown RBP8.64□□□□□ -1.03
SMAD1-213ENST00000514778 MCAMP43121 646 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 GSTO1P78417 241 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 HHIPL2Q6UWX4 724 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 C16orf71Q8IYS4 520 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-213ENST00000514778 CERS5Q8N5B7 392 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 HAUS7Q99871 368 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 CRISPLD2Q9H0B8 497 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 MYOZ2Q9NPC6 264 aa8.64□□□□□ -1.03
SMAD1-213ENST00000514778 SALL3Q9BXA9 1300 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 PITPNM2Q9BZ72 1349 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 SMARCA5O60264 1052 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 GLRX3O76003 335 aaKnown RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 TOMM70O94826 608 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 LDHCP07864 332 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 MX1P20591 662 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 EPS15P42566 896 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 CHAF1AQ13111 956 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 ERICH6Q7L0X2 663 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 LDHDQ86WU2 507 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 CERS3Q8IU89 383 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 TEKT1Q969V4 418 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 NMRK2Q9NPI5 230 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
SMAD1-213ENST00000514778 TLR7Q9NYK1 1049 aaKnown RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 TTF2Q9UNY4 1162 aaKnown RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 IQSEC3Q9UPP2 1182 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 ZNF646O15015 1829 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 COL1A1P02452 1464 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-213ENST00000514778 MYO1BO43795 1136 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 CYP2E1P05181 493 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-213ENST00000514778 FSTL1Q12841 308 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 SCARF1Q14162 830 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 DLGAP5Q15398 846 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 LRRFIP1Q32MZ4 808 aaKnown RBP8.62□□□□□ -1.03
SMAD1-213ENST00000514778 FKBP1CQ5VVH2 108 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 ZNF526Q8TF50 670 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-213ENST00000514778 RNF166Q96A37 237 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-213ENST00000514778 ZBED3Q96IU2 234 aaPredicted RBP8.62□□□□□ -1.03
SMAD1-213ENST00000514778 CCDC136Q96JN2 1154 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 ZDHHC15Q96MV8 337 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 SCN9AQ15858 1988 aa8.62□□□□□ -1.03
SMAD1-213ENST00000514778 ZAP70P43403 619 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 PDE1AP54750 535 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 MAP3K12Q12852 859 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 KIF4BQ2VIQ3 1234 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 CFAP100Q494V2 611 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 B4GALNT3Q6L9W6 998 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 ZSCAN25Q6NSZ9 544 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
SMAD1-213ENST00000514778 SMC1BQ8NDV3 1235 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 PI4K2BQ8TCG2 481 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 MXD3Q9BW11 206 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMAD1-213ENST00000514778 PAG1Q9NWQ8 432 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 LRP2BPQ9P2M1 347 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 ABCF2Q9UG63 623 aa8.61□□□□□ -1.03
SMAD1-213ENST00000514778 GAKO14976 1311 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 GPR75-ASB3A0A0A6YYF3 556 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 WNT10BO00744 389 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 ZFYP08048 801 aaPredicted RBP8.6□□□□□ -1.03
SMAD1-213ENST00000514778 PDE4AP27815 886 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 PRDX5P30044 214 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 CRKP46108 304 aa8.6□□□□□ -1.03
SMAD1-213ENST00000514778 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms