RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 CUL4BQ13620 913 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 ZSWIM4Q9H7M6 989 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 ZWILCHQ9H900 591 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 C15orf41Q9Y2V0 281 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 MGRN1O60291 552 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
CDH6-205ENST00000514738 RBM43Q6ZSC3 357 aaKnown RBP18.38■□□□□ 0.53
CDH6-205ENST00000514738 TRIML1Q8N9V2 468 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 STAMBPL1Q96FJ0 436 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
CDH6-205ENST00000514738 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
CDH6-205ENST00000514738 KIAA0753Q2KHM9 967 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 GALNT8Q9NY28 637 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 TCOF1Q13428 1488 aaKnown RBP18.37■□□□□ 0.53
CDH6-205ENST00000514738 BTG3Q14201 252 aaPredicted RBP18.37■□□□□ 0.53
CDH6-205ENST00000514738 PCMTD2Q9NV79 361 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 TUBGCP4Q9UGJ1 667 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 GOLGA6L9A6NEM1 432 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 CEP104O60308 925 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
CDH6-205ENST00000514738 SLF2Q8IX21 1173 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 CEP57L1Q8IYX8 460 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
CDH6-205ENST00000514738 TBC1D31Q96DN5 1066 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 UBAP1Q9NZ09 502 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 ABCF2Q9UG63 623 aa18.37■□□□□ 0.53
CDH6-205ENST00000514738 BZW2Q9Y6E2 419 aaKnown RBP18.37■□□□□ 0.53
CDH6-205ENST00000514738 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
CDH6-205ENST00000514738 MYBL1P10243 752 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 HARSP12081 509 aaKnown RBP18.36■□□□□ 0.53
CDH6-205ENST00000514738 PSMC1P62191 440 aaKnown RBP18.36■□□□□ 0.53
CDH6-205ENST00000514738 DRP2Q13474 957 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 SLC4A8Q2Y0W8 1093 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 TTC30AQ86WT1 665 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 ZFATQ9P243 1243 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 DISP1Q96F81 1524 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 STX6O43752 255 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 GNAQP50148 359 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 VSNL1P62760 191 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 ZNF394Q53GI3 561 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 WDR24Q96S15 920 aa18.36■□□□□ 0.53
CDH6-205ENST00000514738 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDH6-205ENST00000514738 RABL2AQ9UBK7 228 aaPredicted RBP18.36■□□□□ 0.53
CDH6-205ENST00000514738 PTPRGP23470 1445 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 ABL1P00519 1130 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 SRGAP1Q7Z6B7 1085 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 CCDC65Q8IXS2 484 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 DHX58Q96C10 678 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 ZNF570Q96NI8 536 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 ANO10Q9NW15 660 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 N6AMT1Q9Y5N5 214 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 EIF3FO00303 357 aaPredicted RBP18.35■□□□□ 0.53
CDH6-205ENST00000514738 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
CDH6-205ENST00000514738 RIN2Q8WYP3 895 aaPredicted RBP18.35■□□□□ 0.53
CDH6-205ENST00000514738 PREBQ9HCU5 417 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 NLRP2Q9NX02 1062 aa18.35■□□□□ 0.53
CDH6-205ENST00000514738 GNG11P61952 73 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 DYNC1I2Q13409 638 aaKnown RBP18.34■□□□□ 0.53
CDH6-205ENST00000514738 PIDD1Q9HB75 910 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 HMMRO75330 724 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 ALOX15P16050 662 aaPredicted RBP18.34■□□□□ 0.53
CDH6-205ENST00000514738 PABPC1LQ4VXU2 614 aaKnown RBP18.34■□□□□ 0.53
CDH6-205ENST00000514738 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 TEKT4Q8WW24 435 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
CDH6-205ENST00000514738 ACTR5Q9H9F9 607 aaPredicted RBP18.34■□□□□ 0.53
CDH6-205ENST00000514738 HAUS2Q9NVX0 235 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 WDR35Q9P2L0 1181 aa18.34■□□□□ 0.53
CDH6-205ENST00000514738 CLTCL1P53675 1640 aa18.33■□□□□ 0.53
CDH6-205ENST00000514738 TIMM44O43615 452 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 TMEM57Q8N5G2 664 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 UHMK1Q8TAS1 419 aaKnown RBP18.33■□□□□ 0.52
CDH6-205ENST00000514738 RETREG1Q9H6L5 497 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 PIK3C2GO75747 1445 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 VWA3AA6NCI4 1184 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 ANP32DO95626 131 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 WHAMMQ8TF30 809 aa18.33■□□□□ 0.52
CDH6-205ENST00000514738 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 CLSTN2Q9H4D0 955 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 NOD2Q9HC29 1040 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 C2CD2Q9Y426 696 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 ABL2P42684 1182 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 HDAC4P56524 1084 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 SMUG1Q53HV7 270 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 RPAP2Q8IXW5 612 aaPredicted RBP18.32■□□□□ 0.52
CDH6-205ENST00000514738 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
CDH6-205ENST00000514738 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
CDH6-205ENST00000514738 DDX19AQ9NUU7 478 aaKnown RBP18.32■□□□□ 0.52
CDH6-205ENST00000514738 CUTAO60888 179 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
CDH6-205ENST00000514738 CCDC38Q502W7 563 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 PLEKHM2Q8IWE5 1019 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 JAKMIP2Q96AA8 810 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 A0A1B0GVL5 298 aa18.31■□□□□ 0.52
CDH6-205ENST00000514738 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms