RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 HIBADHP31937 336 aaKnown RBP11.83□□□□□ -0.52
TPM3-221ENST00000513769 PHKA1P46020 1223 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 KCNJ4P48050 445 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 KRT32Q14532 448 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 VPS37DQ86XT2 251 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 APPBP2Q92624 585 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 MASTLQ96GX5 879 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 FAM227BQ96M60 508 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 XDHP47989 1333 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 CCDC171Q6TFL3 1326 aa11.83□□□□□ -0.52
TPM3-221ENST00000513769 MMP10P09238 476 aa11.82□□□□□ -0.52
TPM3-221ENST00000513769 BCAMP50895 628 aa11.82□□□□□ -0.52
TPM3-221ENST00000513769 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
TPM3-221ENST00000513769 ZGPATQ8N5A5 531 aaKnown RBP11.82□□□□□ -0.52
TPM3-221ENST00000513769 A0A0D9SFI3 127 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 H0YIN7 160 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 HMGB1P09429 215 aaKnown RBP11.81□□□□□ -0.52
TPM3-221ENST00000513769 ADD2P35612 726 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 SCARF1Q14162 830 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 SLC9C2Q5TAH2 1124 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 SPTY2D1Q68D10 685 aaPredicted RBP11.81□□□□□ -0.52
TPM3-221ENST00000513769 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 STYK1Q6J9G0 422 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
TPM3-221ENST00000513769 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 ANKIB1Q9P2G1 1089 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 ATP6V0A2Q9Y487 856 aa11.81□□□□□ -0.52
TPM3-221ENST00000513769 RPAP1Q9BWH6 1393 aaPredicted RBP11.8□□□□□ -0.52
TPM3-221ENST00000513769 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 CHD4Q14839 1912 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 K7ELQ4 463 aaPredicted RBP11.8□□□□□ -0.52
TPM3-221ENST00000513769 MAP3K7O43318 606 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
TPM3-221ENST00000513769 GNAT2P19087 354 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 NEK4P51957 841 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 PTH1RQ03431 593 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 CNKSR1Q969H4 720 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 CWC22Q9HCG8 908 aaKnown RBP11.8□□□□□ -0.52
TPM3-221ENST00000513769 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 ARIH1Q9Y4X5 557 aaPredicted RBP11.8□□□□□ -0.52
TPM3-221ENST00000513769 SNX14Q9Y5W7 946 aa11.8□□□□□ -0.52
TPM3-221ENST00000513769 PATL2C9JE40 543 aaKnown RBP11.79□□□□□ -0.52
TPM3-221ENST00000513769 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
TPM3-221ENST00000513769 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 ALX1Q15699 326 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 CREB3L3Q68CJ9 461 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 TDRD7Q8NHU6 1098 aaKnown RBP11.79□□□□□ -0.52
TPM3-221ENST00000513769 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 IL25Q9H293 177 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 LRP2BPQ9P2M1 347 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
TPM3-221ENST00000513769 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
TPM3-221ENST00000513769 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
TPM3-221ENST00000513769 QSER1Q2KHR3 1735 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 NRXN2Q9P2S2 1712 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
TPM3-221ENST00000513769 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
TPM3-221ENST00000513769 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 ZNF804AQ7Z570 1209 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 OSBP2Q969R2 916 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
TPM3-221ENST00000513769 CYP46A1Q9Y6A2 500 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 IRS2Q9Y4H2 1338 aa11.78□□□□□ -0.52
TPM3-221ENST00000513769 TCRBV5S4A2TA0A5A2 114 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 SLC27A2O14975 620 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
TPM3-221ENST00000513769 IL1R1P14778 569 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 GYG1P46976 350 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
TPM3-221ENST00000513769 RUFY3Q7L099 469 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 ZNF589Q86UQ0 364 aaPredicted RBP11.77□□□□□ -0.53
TPM3-221ENST00000513769 FBXL16Q8N461 479 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 ANKK1Q8NFD2 765 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.53
TPM3-221ENST00000513769 VPS33BQ9H267 617 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 PIH1D3Q9NQM4 214 aaKnown RBP11.77□□□□□ -0.53
TPM3-221ENST00000513769 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
TPM3-221ENST00000513769 UTRNP46939 3433 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 SNAP23O00161 211 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 PPEF1O14829 653 aaPredicted RBP11.76□□□□□ -0.53
TPM3-221ENST00000513769 GRIN3BO60391 1043 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 LDHCP07864 332 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 PDE6AP16499 860 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 NT5C2P49902 561 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 GPSM2P81274 684 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 MPNDQ8N594 471 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 TBC1D16Q8TBP0 767 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms