RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 LMBR1LQ6UX01 489 aa15.3■□□□□ 0.04
PTPN20-229ENST00000513756 VPS37DQ86XT2 251 aa15.3■□□□□ 0.04
PTPN20-229ENST00000513756 FAM84BQ96KN1 310 aaPredicted RBP15.3■□□□□ 0.04
PTPN20-229ENST00000513756 PARK7Q99497 189 aaKnown RBP15.3■□□□□ 0.04
PTPN20-229ENST00000513756 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
PTPN20-229ENST00000513756 UNC93B1Q9H1C4 597 aa15.3■□□□□ 0.04
PTPN20-229ENST00000513756 STAP2Q9UGK3 403 aa15.3■□□□□ 0.04
PTPN20-229ENST00000513756 ADGRA2Q96PE1 1338 aa15.29■□□□□ 0.04
PTPN20-229ENST00000513756 CACNB3P54284 484 aa15.29■□□□□ 0.04
PTPN20-229ENST00000513756 ZNF594Q96JF6 807 aaPredicted RBP15.29■□□□□ 0.04
PTPN20-229ENST00000513756 KCNH4Q9UQ05 1017 aa15.29■□□□□ 0.04
PTPN20-229ENST00000513756 ADCY3O60266 1144 aa15.28■□□□□ 0.04
PTPN20-229ENST00000513756 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
PTPN20-229ENST00000513756 BMP8BP34820 402 aa15.28■□□□□ 0.04
PTPN20-229ENST00000513756 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
PTPN20-229ENST00000513756 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
PTPN20-229ENST00000513756 RPAP1Q9BWH6 1393 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-229ENST00000513756 MAST3O60307 1309 aa15.27■□□□□ 0.04
PTPN20-229ENST00000513756 CHAF1AQ13111 956 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-229ENST00000513756 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
PTPN20-229ENST00000513756 PXYLP1Q8TE99 480 aa15.27■□□□□ 0.04
PTPN20-229ENST00000513756 BCRP11274 1271 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 INPP5BP32019 993 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 CAVIN4Q5BKX8 364 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 MIGA2Q7L4E1 593 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 FBXO33Q7Z6M2 555 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 GABRQQ9UN88 632 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 STXBP5LQ9Y2K9 1186 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
PTPN20-229ENST00000513756 CXCL11O14625 94 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 INHAP05111 366 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 GRIK5Q16478 980 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 APOBEC3HQ6NTF7 200 aaKnown RBP15.25■□□□□ 0.03
PTPN20-229ENST00000513756 NECAB2Q7Z6G3 386 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 DEFB118Q96PH6 123 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 MGAMO43451 1857 aa15.25■□□□□ 0.03
PTPN20-229ENST00000513756 MROH5Q6ZUA9 1318 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 FLT3LGP49771 235 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 IRF5Q13568 498 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 MOGSQ13724 837 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 EPHA10Q5JZY3 1008 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 NOL9Q5SY16 702 aaKnown RBP15.24■□□□□ 0.03
PTPN20-229ENST00000513756 HHIPL2Q6UWX4 724 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 FASTKD5Q7L8L6 764 aaKnown RBP15.24■□□□□ 0.03
PTPN20-229ENST00000513756 FAM151AQ8WW52 585 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 GDF15Q99988 308 aa15.24■□□□□ 0.03
PTPN20-229ENST00000513756 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
PTPN20-229ENST00000513756 GRM8O00222 908 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 CYP2C8P10632 490 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 ELNP15502 786 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 LRIT3Q3SXY7 679 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 BEND3Q5T5X7 828 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 PAWRQ96IZ0 340 aaKnown RBP15.23■□□□□ 0.03
PTPN20-229ENST00000513756 CRISPLD2Q9H0B8 497 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 PAK6Q9NQU5 681 aaPredicted RBP15.23■□□□□ 0.03
PTPN20-229ENST00000513756 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
PTPN20-229ENST00000513756 UNC80Q8N2C7 3258 aa15.23■□□□□ 0.03
PTPN20-229ENST00000513756 TNPO2O14787 897 aaKnown RBP15.22■□□□□ 0.03
PTPN20-229ENST00000513756 BCAMP50895 628 aa15.22■□□□□ 0.03
PTPN20-229ENST00000513756 GPAT2Q6NUI2 795 aa15.22■□□□□ 0.03
PTPN20-229ENST00000513756 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
PTPN20-229ENST00000513756 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
PTPN20-229ENST00000513756 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.03
PTPN20-229ENST00000513756 Q7L0L9 218 aa15.21■□□□□ 0.03
PTPN20-229ENST00000513756 C7orf61Q8IZ16 206 aa15.21■□□□□ 0.03
PTPN20-229ENST00000513756 COA7Q96BR5 231 aa15.21■□□□□ 0.03
PTPN20-229ENST00000513756 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
PTPN20-229ENST00000513756 MTMR10Q9NXD2 777 aa15.21■□□□□ 0.03
PTPN20-229ENST00000513756 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
PTPN20-229ENST00000513756 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-229ENST00000513756 F6X3S4 739 aa15.2■□□□□ 0.02
PTPN20-229ENST00000513756 CCDC27Q2M243 656 aa15.2■□□□□ 0.02
PTPN20-229ENST00000513756 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-229ENST00000513756 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
PTPN20-229ENST00000513756 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
PTPN20-229ENST00000513756 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
PTPN20-229ENST00000513756 ZMYND8Q9ULU4 1186 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-229ENST00000513756 IL16Q14005 1332 aa15.19■□□□□ 0.02
PTPN20-229ENST00000513756 TCP10Q12799 353 aa15.19■□□□□ 0.02
PTPN20-229ENST00000513756 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
PTPN20-229ENST00000513756 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
PTPN20-229ENST00000513756 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
PTPN20-229ENST00000513756 COL25A1Q9BXS0 654 aaPredicted RBP15.19■□□□□ 0.02
PTPN20-229ENST00000513756 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
PTPN20-229ENST00000513756 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTPN20-229ENST00000513756 ALPK3Q96L96 1907 aa15.18■□□□□ 0.02
PTPN20-229ENST00000513756 ALDH1L1O75891 902 aa15.18■□□□□ 0.02
PTPN20-229ENST00000513756 WWC1Q8IX03 1113 aa15.18■□□□□ 0.02
PTPN20-229ENST00000513756 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
PTPN20-229ENST00000513756 ZHX2Q9Y6X8 837 aa15.18■□□□□ 0.02
PTPN20-229ENST00000513756 PDE8BO95263 885 aa15.17■□□□□ 0.02
PTPN20-229ENST00000513756 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
PTPN20-229ENST00000513756 MAGEA10P43363 369 aaPredicted RBP15.17■□□□□ 0.02
PTPN20-229ENST00000513756 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
PTPN20-229ENST00000513756 WDR66Q8TBY9 1149 aa15.17■□□□□ 0.02
PTPN20-229ENST00000513756 UBE2OQ9C0C9 1292 aaKnown RBP15.17■□□□□ 0.02
PTPN20-229ENST00000513756 KIF16BQ96L93 1317 aa15.17■□□□□ 0.02
PTPN20-229ENST00000513756 VAMP4O75379 141 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms