RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TRIOBPQ9H2D6 2365 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 DOCK2Q92608 1830 aa12.14□□□□□ -0.47
TCOF1-212ENST00000513538 PTPRFP10586 1907 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 MOGSQ13724 837 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 USP44Q9H0E7 712 aa12.13□□□□□ -0.47
TCOF1-212ENST00000513538 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
TCOF1-212ENST00000513538 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-212ENST00000513538 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-212ENST00000513538 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-212ENST00000513538 NFIAQ12857 509 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 MTFR1Q15390 333 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
TCOF1-212ENST00000513538 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 SLC4A8Q2Y0W8 1093 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 DAGLAQ9Y4D2 1042 aa12.12□□□□□ -0.47
TCOF1-212ENST00000513538 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 H0YGN5 161 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 PPATQ06203 517 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 TCP10Q12799 353 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 ZNF112Q9UJU3 913 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 KCNH4Q9UQ05 1017 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 MAST3O60307 1309 aa12.11□□□□□ -0.47
TCOF1-212ENST00000513538 EYA2O00167 538 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 OSBPP22059 807 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 PRDX5P30044 214 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 DCAF15Q66K64 600 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 ANKRD23Q86SG2 305 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 FAM198AQ9UFP1 575 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 SRRDQ9UH36 339 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 PTPRCP08575 1304 aa12.1□□□□□ -0.47
TCOF1-212ENST00000513538 RFX7Q2KHR2 1363 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 PDHXO00330 501 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 ANP32CO43423 234 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 GNRH1P01148 92 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
TCOF1-212ENST00000513538 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 PSMC4P43686 418 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 KIF22Q14807 665 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 GPAT2Q6NUI2 795 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 HOOK2Q96ED9 719 aa12.09□□□□□ -0.47
TCOF1-212ENST00000513538 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 DOCK3Q8IZD9 2030 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 BCRP11274 1271 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 SLC5A1P13866 664 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 PRMT2P55345 433 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 NOL9Q5SY16 702 aaKnown RBP12.08□□□□□ -0.48
TCOF1-212ENST00000513538 UBE2Q1Q7Z7E8 422 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 LPIN2Q92539 896 aa12.08□□□□□ -0.48
TCOF1-212ENST00000513538 PHF20L1A8MW92 1017 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 WDHD1O75717 1129 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-212ENST00000513538 CYP2C8P10632 490 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 PHKA1P46020 1223 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 PRKCZQ05513 592 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 SIL1Q9H173 461 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 ALPK3Q96L96 1907 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 MYPNQ86TC9 1320 aa12.07□□□□□ -0.48
TCOF1-212ENST00000513538 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-212ENST00000513538 ADORA1P30542 326 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 GRK4P32298 578 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 USP40Q9NVE5 1235 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-212ENST00000513538 GABRQQ9UN88 632 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
TCOF1-212ENST00000513538 FMNL1O95466 1100 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-212ENST00000513538 CCL5P13501 91 aa12.05□□□□□ -0.48
TCOF1-212ENST00000513538 RGS3P49796 1198 aa12.05□□□□□ -0.48
TCOF1-212ENST00000513538 ATP2B3Q16720 1220 aa12.05□□□□□ -0.48
TCOF1-212ENST00000513538 RAET1EQ8TD07 263 aa12.05□□□□□ -0.48
TCOF1-212ENST00000513538 PARK7Q99497 189 aaKnown RBP12.05□□□□□ -0.48
TCOF1-212ENST00000513538 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
TCOF1-212ENST00000513538 PA2G4Q9UQ80 394 aaKnown RBP12.05□□□□□ -0.48
TCOF1-212ENST00000513538 GAKO14976 1311 aa12.05□□□□□ -0.48
TCOF1-212ENST00000513538 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 A0A0G2JLL6 359 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-212ENST00000513538 CXCL11O14625 94 aa12.04□□□□□ -0.48
TCOF1-212ENST00000513538 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms