RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ARMC9Q7Z3E5 817 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 ZNF687Q8N1G0 1237 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 ABHD8Q96I13 439 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 RNF186Q9NXI6 227 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.45
CCL28-203ENST00000513525 PUM3Q15397 648 aaKnown RBP12.26□□□□□ -0.45
CCL28-203ENST00000513525 LDLRAD1Q5T700 205 aa12.26□□□□□ -0.45
CCL28-203ENST00000513525 TBC1D22AQ8WUA7 517 aa12.26□□□□□ -0.45
CCL28-203ENST00000513525 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
CCL28-203ENST00000513525 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
CCL28-203ENST00000513525 CLRN2A0PK11 232 aa12.25□□□□□ -0.45
CCL28-203ENST00000513525 UNCXA6NJT0 531 aa12.25□□□□□ -0.45
CCL28-203ENST00000513525 TRPA1O75762 1119 aa12.25□□□□□ -0.45
CCL28-203ENST00000513525 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
CCL28-203ENST00000513525 RBM5P52756 815 aaKnown RBP eCLIP12.25□□□□□ -0.45
CCL28-203ENST00000513525 HDLBPQ00341 1268 aaKnown RBP12.25□□□□□ -0.45
CCL28-203ENST00000513525 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
CCL28-203ENST00000513525 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
CCL28-203ENST00000513525 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CCL28-203ENST00000513525 AOX1Q06278 1338 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 CIAO1O76071 339 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 TM4SF4P48230 202 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 TNFAIP1Q13829 316 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 SUPT20HL1Q3ZLR7 823 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 INTS3Q68E01 1043 aaKnown RBP12.24□□□□□ -0.45
CCL28-203ENST00000513525 LPIN2Q92539 896 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 VEZTQ9HBM0 779 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 ANGEL1Q9UNK9 670 aaKnown RBP12.24□□□□□ -0.45
CCL28-203ENST00000513525 IQSEC3Q9UPP2 1182 aaPredicted RBP12.24□□□□□ -0.45
CCL28-203ENST00000513525 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 DOCK2Q92608 1830 aa12.24□□□□□ -0.45
CCL28-203ENST00000513525 PPP1R12BO60237 982 aaPredicted RBP12.23□□□□□ -0.45
CCL28-203ENST00000513525 FRAT2O75474 233 aaPredicted RBP12.23□□□□□ -0.45
CCL28-203ENST00000513525 SLC5A1P13866 664 aa12.23□□□□□ -0.45
CCL28-203ENST00000513525 CRKP46108 304 aa12.23□□□□□ -0.45
CCL28-203ENST00000513525 BCAMP50895 628 aa12.23□□□□□ -0.45
CCL28-203ENST00000513525 PRKG1Q13976 671 aa12.23□□□□□ -0.45
CCL28-203ENST00000513525 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
CCL28-203ENST00000513525 MRIQ9BWK5 157 aa12.23□□□□□ -0.45
CCL28-203ENST00000513525 ZNF70Q9UC06 446 aaPredicted RBP12.23□□□□□ -0.45
CCL28-203ENST00000513525 LRRFIP2Q9Y608 721 aaKnown RBP12.23□□□□□ -0.45
CCL28-203ENST00000513525 MAST3O60307 1309 aa12.23□□□□□ -0.45
CCL28-203ENST00000513525 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
CCL28-203ENST00000513525 RASA3Q14644 834 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 GRIK5Q16478 980 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 NBPF12Q5TAG4 269 aaPredicted RBP12.22□□□□□ -0.45
CCL28-203ENST00000513525 EFCAB3Q8N7B9 438 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 EXOC6Q8TAG9 804 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 MEIS3Q99687 375 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 MCOLN1Q9GZU1 580 aa12.22□□□□□ -0.45
CCL28-203ENST00000513525 TDRD3Q9H7E2 651 aaKnown RBP12.22□□□□□ -0.45
CCL28-203ENST00000513525 GNAI3P08754 354 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 ZBTB48P10074 688 aaPredicted RBP12.21□□□□□ -0.45
CCL28-203ENST00000513525 MTX1Q13505 466 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 DGKZQ13574 1117 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 TEKT1Q969V4 418 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 CFHR5Q9BXR6 569 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 COPRSQ9NQ92 184 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 FZD1Q9UP38 647 aa12.21□□□□□ -0.45
CCL28-203ENST00000513525 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.46
CCL28-203ENST00000513525 IL15P40933 162 aaPredicted RBP12.21□□□□□ -0.46
CCL28-203ENST00000513525 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.46
CCL28-203ENST00000513525 NOM1Q5C9Z4 860 aaKnown RBP12.21□□□□□ -0.46
CCL28-203ENST00000513525 WDR66Q8TBY9 1149 aa12.21□□□□□ -0.46
CCL28-203ENST00000513525 ZDHHC15Q96MV8 337 aa12.21□□□□□ -0.46
CCL28-203ENST00000513525 TEPSINQ96N21 525 aa12.21□□□□□ -0.46
CCL28-203ENST00000513525 SIL1Q9H173 461 aa12.21□□□□□ -0.46
CCL28-203ENST00000513525 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.46
CCL28-203ENST00000513525 MYO5AQ9Y4I1 1855 aaKnown RBP12.2□□□□□ -0.46
CCL28-203ENST00000513525 USP2O75604 605 aaPredicted RBP12.2□□□□□ -0.46
CCL28-203ENST00000513525 TRIM27P14373 513 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 TNNI2P48788 182 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 INHBEP58166 350 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 SLC10A4Q96EP9 437 aa12.2□□□□□ -0.46
CCL28-203ENST00000513525 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
CCL28-203ENST00000513525 MANSC4A6NHS7 340 aaPredicted RBP12.19□□□□□ -0.46
CCL28-203ENST00000513525 FKBP1CQ5VVH2 108 aa12.19□□□□□ -0.46
CCL28-203ENST00000513525 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
CCL28-203ENST00000513525 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
CCL28-203ENST00000513525 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
CCL28-203ENST00000513525 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
CCL28-203ENST00000513525 SALL1Q9NSC2 1324 aa12.19□□□□□ -0.46
CCL28-203ENST00000513525 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 SEMA3EO15041 775 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 BCAR3O75815 825 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 ALDH1A1P00352 501 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 FAM83AQ86UY5 434 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 CRBNQ96SW2 442 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
CCL28-203ENST00000513525 MAST2Q6P0Q8 1798 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 PTPRFP10586 1907 aa12.18□□□□□ -0.46
CCL28-203ENST00000513525 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms