RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TEKT1Q969V4 418 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 TRIM47Q96LD4 638 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 GRM8O00222 908 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 PSMC4P43686 418 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 EPHA10Q5JZY3 1008 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 ANKRD23Q86SG2 305 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 ZKSCAN4Q969J2 545 aaPredicted RBP17.62■□□□□ 0.41
SPCS3-204ENST00000513139 TMOD2Q9NZR1 351 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 RIPOR2Q9Y4F9 1068 aa17.62■□□□□ 0.41
SPCS3-204ENST00000513139 RPAP1Q9BWH6 1393 aaPredicted RBP17.62■□□□□ 0.41
SPCS3-204ENST00000513139 A0A1W2PPC1 479 aa17.61■□□□□ 0.41
SPCS3-204ENST00000513139 CTGFP29279 349 aa17.61■□□□□ 0.41
SPCS3-204ENST00000513139 FBXO33Q7Z6M2 555 aa17.61■□□□□ 0.41
SPCS3-204ENST00000513139 RAET1EQ8TD07 263 aa17.61■□□□□ 0.41
SPCS3-204ENST00000513139 ZDHHC15Q96MV8 337 aa17.61■□□□□ 0.41
SPCS3-204ENST00000513139 CCL5P13501 91 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 CAPN2P17655 700 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 OSBPP22059 807 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 GRIK5Q16478 980 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 VPS37DQ86XT2 251 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 SLC17A8Q8NDX2 589 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 CPA4Q9UI42 421 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 SUGT1Q9Y2Z0 365 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 ADGRA2Q96PE1 1338 aa17.6■□□□□ 0.41
SPCS3-204ENST00000513139 MAST3O60307 1309 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 MYPNQ86TC9 1320 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 F6X3S4 739 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 DLL1O00548 723 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 VAMP4O75379 141 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
SPCS3-204ENST00000513139 CACNB3P54284 484 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 UBXN2AP68543 259 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
SPCS3-204ENST00000513139 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 RNF208Q9H0X6 261 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 KCNH4Q9UQ05 1017 aa17.59■□□□□ 0.41
SPCS3-204ENST00000513139 PDHXO00330 501 aa17.58■□□□□ 0.4
SPCS3-204ENST00000513139 APOBEC3HQ6NTF7 200 aaKnown RBP17.58■□□□□ 0.4
SPCS3-204ENST00000513139 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
SPCS3-204ENST00000513139 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
SPCS3-204ENST00000513139 ZBTB7BO15156 539 aaPredicted RBP17.57■□□□□ 0.4
SPCS3-204ENST00000513139 CAVIN4Q5BKX8 364 aa17.57■□□□□ 0.4
SPCS3-204ENST00000513139 HHIPL2Q6UWX4 724 aa17.57■□□□□ 0.4
SPCS3-204ENST00000513139 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
SPCS3-204ENST00000513139 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
SPCS3-204ENST00000513139 BIN2Q9UBW5 565 aaPredicted RBP17.57■□□□□ 0.4
SPCS3-204ENST00000513139 ZNF112Q9UJU3 913 aa17.57■□□□□ 0.4
SPCS3-204ENST00000513139 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
SPCS3-204ENST00000513139 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
SPCS3-204ENST00000513139 ALDH1L1O75891 902 aa17.56■□□□□ 0.4
SPCS3-204ENST00000513139 CHAF1AQ13111 956 aaPredicted RBP17.56■□□□□ 0.4
SPCS3-204ENST00000513139 U2AF1L4Q8WU68 220 aaKnown RBP17.56■□□□□ 0.4
SPCS3-204ENST00000513139 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
SPCS3-204ENST00000513139 PTPRFP10586 1907 aa17.56■□□□□ 0.4
SPCS3-204ENST00000513139 ALPK3Q96L96 1907 aa17.56■□□□□ 0.4
SPCS3-204ENST00000513139 FARP2O94887 1054 aaPredicted RBP17.55■□□□□ 0.4
SPCS3-204ENST00000513139 BCRP11274 1271 aa17.55■□□□□ 0.4
SPCS3-204ENST00000513139 INPP5BP32019 993 aa17.55■□□□□ 0.4
SPCS3-204ENST00000513139 FCGRTP55899 365 aa17.55■□□□□ 0.4
SPCS3-204ENST00000513139 MOGSQ13724 837 aa17.55■□□□□ 0.4
SPCS3-204ENST00000513139 MIGA2Q7L4E1 593 aa17.55■□□□□ 0.4
SPCS3-204ENST00000513139 ECM2O94769 699 aaPredicted RBP17.54■□□□□ 0.4
SPCS3-204ENST00000513139 SGPL1O95470 568 aa17.54■□□□□ 0.4
SPCS3-204ENST00000513139 PRKCZQ05513 592 aa17.54■□□□□ 0.4
SPCS3-204ENST00000513139 NOL9Q5SY16 702 aaKnown RBP17.54■□□□□ 0.4
SPCS3-204ENST00000513139 FAM151AQ8WW52 585 aa17.54■□□□□ 0.4
SPCS3-204ENST00000513139 PARK7Q99497 189 aaKnown RBP17.54■□□□□ 0.4
SPCS3-204ENST00000513139 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
SPCS3-204ENST00000513139 CXCL11O14625 94 aa17.53■□□□□ 0.4
SPCS3-204ENST00000513139 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
SPCS3-204ENST00000513139 DOCK2Q92608 1830 aa17.52■□□□□ 0.4
SPCS3-204ENST00000513139 EVI5O60447 810 aa17.52■□□□□ 0.4
SPCS3-204ENST00000513139 PDE8BO95263 885 aa17.52■□□□□ 0.4
SPCS3-204ENST00000513139 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.4
SPCS3-204ENST00000513139 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
SPCS3-204ENST00000513139 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.4
SPCS3-204ENST00000513139 UTYO14607 1347 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 ADCY3O60266 1144 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
SPCS3-204ENST00000513139 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
SPCS3-204ENST00000513139 METTL24Q5JXM2 366 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 GPAT2Q6NUI2 795 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 SUCLG2Q96I99 432 aa17.51■□□□□ 0.39
SPCS3-204ENST00000513139 PHIPQ8WWQ0 1821 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 BCAMP50895 628 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 IRF5Q13568 498 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 GPR153Q6NV75 609 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
SPCS3-204ENST00000513139 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 SLC45A1Q9Y2W3 748 aa17.5■□□□□ 0.39
SPCS3-204ENST00000513139 SOX1O00570 391 aaPredicted RBP17.49■□□□□ 0.39
SPCS3-204ENST00000513139 CYP2C8P10632 490 aa17.49■□□□□ 0.39
SPCS3-204ENST00000513139 MNX1P50219 401 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms