RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
MSH3-203ENST00000512531 EVI5LQ96CN4 794 aa11.39□□□□□ -0.59
MSH3-203ENST00000512531 MYD88Q99836 296 aa11.39□□□□□ -0.59
MSH3-203ENST00000512531 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
MSH3-203ENST00000512531 IL1RAPL2Q9NP60 686 aa11.39□□□□□ -0.59
MSH3-203ENST00000512531 ANO2Q9NQ90 1003 aa11.39□□□□□ -0.59
MSH3-203ENST00000512531 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
MSH3-203ENST00000512531 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 ANXA1P04083 346 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 GRAPQ13588 217 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 GCKRQ14397 625 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 LRRFIP1Q32MZ4 808 aaKnown RBP11.38□□□□□ -0.59
MSH3-203ENST00000512531 CIAPIN1Q6FI81 312 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 CYP4F22Q6NT55 531 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
MSH3-203ENST00000512531 CDC37L1Q7L3B6 337 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
MSH3-203ENST00000512531 ANKRD36CQ5JPF3 1778 aa11.38□□□□□ -0.59
MSH3-203ENST00000512531 RAD50Q92878 1312 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 TRAF5O00463 557 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
MSH3-203ENST00000512531 MCM4P33991 863 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 GMPSP49915 693 aaPredicted RBP11.37□□□□□ -0.59
MSH3-203ENST00000512531 TCIRG1Q13488 830 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 NLRP10Q86W26 655 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 DPF2Q92785 391 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
MSH3-203ENST00000512531 SH3TC1Q8TE82 1336 aa11.36□□□□□ -0.59
MSH3-203ENST00000512531 CELF2O95319 508 aaKnown RBP11.36□□□□□ -0.59
MSH3-203ENST00000512531 ZKSCAN1P17029 563 aaPredicted RBP11.36□□□□□ -0.59
MSH3-203ENST00000512531 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
MSH3-203ENST00000512531 CWF19L2Q2TBE0 894 aaKnown RBP11.36□□□□□ -0.59
MSH3-203ENST00000512531 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
MSH3-203ENST00000512531 AACSQ86V21 672 aa11.36□□□□□ -0.59
MSH3-203ENST00000512531 KIF2CQ99661 725 aa11.36□□□□□ -0.59
MSH3-203ENST00000512531 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
MSH3-203ENST00000512531 CWC25Q9NXE8 425 aaPredicted RBP11.36□□□□□ -0.59
MSH3-203ENST00000512531 H7C1D1 291 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 RPS12P25398 132 aaKnown RBP11.35□□□□□ -0.59
MSH3-203ENST00000512531 FMR1Q06787 632 aaKnown RBP eCLIP11.35□□□□□ -0.59
MSH3-203ENST00000512531 NOGQ13253 232 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 MTMR14Q8NCE2 650 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 SUCLG2Q96I99 432 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
MSH3-203ENST00000512531 COPRSQ9NQ92 184 aa11.35□□□□□ -0.59
MSH3-203ENST00000512531 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
MSH3-203ENST00000512531 CNOT7Q9UIV1 285 aaKnown RBP11.35□□□□□ -0.59
MSH3-203ENST00000512531 RFX7Q2KHR2 1363 aa11.34□□□□□ -0.59
MSH3-203ENST00000512531 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 NEK4P51957 841 aa11.34□□□□□ -0.59
MSH3-203ENST00000512531 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 MLLT1Q03111 559 aaPredicted RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 ZNF454Q8N9F8 522 aa11.34□□□□□ -0.59
MSH3-203ENST00000512531 BANK1Q8NDB2 785 aa11.34□□□□□ -0.59
MSH3-203ENST00000512531 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
MSH3-203ENST00000512531 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
MSH3-203ENST00000512531 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
MSH3-203ENST00000512531 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 SGSM2O43147 1006 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 AOC2O75106 756 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 IGKV5-2P06315 115 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
MSH3-203ENST00000512531 PSMA5P28066 241 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 KCNJ4P48050 445 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 PRSS12P56730 875 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
MSH3-203ENST00000512531 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 SAGE1Q9NXZ1 904 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 LAMB2P55268 1798 aa11.33□□□□□ -0.6
MSH3-203ENST00000512531 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 RAD17O75943 681 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 HSPA4P34932 840 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 WASHC4Q2M389 1173 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 RABL6Q3YEC7 729 aaPredicted RBP11.32□□□□□ -0.6
MSH3-203ENST00000512531 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 TRPM4Q8TD43 1214 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 EYA3Q99504 573 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 ISCA1Q9BUE6 129 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.32□□□□□ -0.6
MSH3-203ENST00000512531 DUOX1Q9NRD9 1551 aa11.32□□□□□ -0.6
MSH3-203ENST00000512531 NUDT7P0C024 238 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
MSH3-203ENST00000512531 COL9A1P20849 921 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 DDIT3P35638 169 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 IL15P40933 162 aaPredicted RBP11.31□□□□□ -0.6
MSH3-203ENST00000512531 GRM1Q13255 1194 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
MSH3-203ENST00000512531 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
MSH3-203ENST00000512531 ZSCAN31Q96LW9 406 aaPredicted RBP11.31□□□□□ -0.6
MSH3-203ENST00000512531 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms