RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 TSHZ3Q63HK5 1081 aa23.8■■□□□ 1.4
SMAD1-211ENST00000512019 PLEKHM2Q8IWE5 1019 aa23.8■■□□□ 1.4
SMAD1-211ENST00000512019 OSBPL3Q9H4L5 887 aa23.79■■□□□ 1.4
SMAD1-211ENST00000512019 FKBP1AP62942 108 aaKnown RBP23.78■■□□□ 1.4
SMAD1-211ENST00000512019 ZGPATQ8N5A5 531 aaKnown RBP23.78■■□□□ 1.4
SMAD1-211ENST00000512019 PI4K2BQ8TCG2 481 aa23.78■■□□□ 1.4
SMAD1-211ENST00000512019 HAUS7Q99871 368 aa23.78■■□□□ 1.4
SMAD1-211ENST00000512019 BOLA2Q9H3K6 86 aa23.78■■□□□ 1.4
SMAD1-211ENST00000512019 JAG2Q9Y219 1238 aa23.78■■□□□ 1.4
SMAD1-211ENST00000512019 SALL1Q9NSC2 1324 aa23.78■■□□□ 1.4
SMAD1-211ENST00000512019 MLLT1Q03111 559 aaPredicted RBP23.77■■□□□ 1.4
SMAD1-211ENST00000512019 TTLL12Q14166 644 aaPredicted RBP23.77■■□□□ 1.4
SMAD1-211ENST00000512019 MFSD14BQ5SR56 506 aa23.77■■□□□ 1.4
SMAD1-211ENST00000512019 PI16Q6UXB8 463 aa23.77■■□□□ 1.4
SMAD1-211ENST00000512019 ZBED3Q96IU2 234 aaPredicted RBP23.77■■□□□ 1.4
SMAD1-211ENST00000512019 DNAJC2Q99543 621 aaKnown RBP23.77■■□□□ 1.4
SMAD1-211ENST00000512019 SNRKQ9NRH2 765 aa23.77■■□□□ 1.4
SMAD1-211ENST00000512019 ZAP70P43403 619 aa23.76■■□□□ 1.39
SMAD1-211ENST00000512019 CERS5Q8N5B7 392 aa23.76■■□□□ 1.39
SMAD1-211ENST00000512019 PRKG1Q13976 671 aa23.75■■□□□ 1.39
SMAD1-211ENST00000512019 TTF1Q15361 905 aaPredicted RBP23.75■■□□□ 1.39
SMAD1-211ENST00000512019 HDAC9Q9UKV0 1011 aa23.75■■□□□ 1.39
SMAD1-211ENST00000512019 PCDHAC2Q9Y5I4 1007 aa23.75■■□□□ 1.39
SMAD1-211ENST00000512019 MKRN3Q13064 507 aaKnown RBP23.74■■□□□ 1.39
SMAD1-211ENST00000512019 SPTY2D1Q68D10 685 aaPredicted RBP23.74■■□□□ 1.39
SMAD1-211ENST00000512019 PAG1Q9NWQ8 432 aa23.74■■□□□ 1.39
SMAD1-211ENST00000512019 SUGT1Q9Y2Z0 365 aa23.74■■□□□ 1.39
SMAD1-211ENST00000512019 GOLIM4O00461 696 aa23.73■■□□□ 1.39
SMAD1-211ENST00000512019 CYP2E1P05181 493 aaPredicted RBP23.73■■□□□ 1.39
SMAD1-211ENST00000512019 REM2Q8IYK8 340 aaPredicted RBP23.73■■□□□ 1.39
SMAD1-211ENST00000512019 ABCF2Q9UG63 623 aa23.73■■□□□ 1.39
SMAD1-211ENST00000512019 FZD1Q9UP38 647 aa23.73■■□□□ 1.39
SMAD1-211ENST00000512019 NF2P35240 595 aa23.72■■□□□ 1.39
SMAD1-211ENST00000512019 RGS3P49796 1198 aa23.72■■□□□ 1.39
SMAD1-211ENST00000512019 APOBEC3FQ8IUX4 373 aaKnown RBP23.72■■□□□ 1.39
SMAD1-211ENST00000512019 NDUFB9Q9Y6M9 179 aa23.72■■□□□ 1.39
SMAD1-211ENST00000512019 MAST3O60307 1309 aa23.71■■□□□ 1.39
SMAD1-211ENST00000512019 F8W031 263 aaPredicted RBP23.71■■□□□ 1.39
SMAD1-211ENST00000512019 IGSF3O75054 1194 aa23.71■■□□□ 1.39
SMAD1-211ENST00000512019 LDHBP07195 334 aaKnown RBP23.71■■□□□ 1.39
SMAD1-211ENST00000512019 MMP14P50281 582 aa23.71■■□□□ 1.39
SMAD1-211ENST00000512019 LRP2BPQ9P2M1 347 aa23.71■■□□□ 1.39
SMAD1-211ENST00000512019 TBC1D8O95759 1140 aa23.7■■□□□ 1.38
SMAD1-211ENST00000512019 TTC22Q5TAA0 569 aa23.7■■□□□ 1.38
SMAD1-211ENST00000512019 TBC1D9Q6ZT07 1266 aa23.7■■□□□ 1.38
SMAD1-211ENST00000512019 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
SMAD1-211ENST00000512019 SKAP1Q86WV1 359 aa23.7■■□□□ 1.38
SMAD1-211ENST00000512019 SSC5DA1L4H1 1573 aa23.69■■□□□ 1.38
SMAD1-211ENST00000512019 TNRC18O15417 2968 aaPredicted RBP23.69■■□□□ 1.38
SMAD1-211ENST00000512019 DOCK2Q92608 1830 aa23.69■■□□□ 1.38
SMAD1-211ENST00000512019 PRDX5P30044 214 aa23.69■■□□□ 1.38
SMAD1-211ENST00000512019 DLGAP5Q15398 846 aa23.69■■□□□ 1.38
SMAD1-211ENST00000512019 CTU1Q7Z7A3 348 aaKnown RBP23.69■■□□□ 1.38
SMAD1-211ENST00000512019 ANTXR1Q9H6X2 564 aa23.69■■□□□ 1.38
SMAD1-211ENST00000512019 PIH1D3Q9NQM4 214 aaKnown RBP23.69■■□□□ 1.38
SMAD1-211ENST00000512019 MAST2Q6P0Q8 1798 aa23.69■■□□□ 1.38
SMAD1-211ENST00000512019 LAMB1P07942 1786 aa23.68■■□□□ 1.38
SMAD1-211ENST00000512019 IDH1O75874 414 aaKnown RBP23.68■■□□□ 1.38
SMAD1-211ENST00000512019 MAP4K4O95819 1239 aaPredicted RBP23.68■■□□□ 1.38
SMAD1-211ENST00000512019 TM4SF4P48230 202 aa23.68■■□□□ 1.38
SMAD1-211ENST00000512019 MAP3K12Q12852 859 aa23.68■■□□□ 1.38
SMAD1-211ENST00000512019 ARMC9Q7Z3E5 817 aa23.68■■□□□ 1.38
SMAD1-211ENST00000512019 DZIP1Q86YF9 867 aaKnown RBP23.68■■□□□ 1.38
SMAD1-211ENST00000512019 EVI5LQ96CN4 794 aa23.68■■□□□ 1.38
SMAD1-211ENST00000512019 EDC3Q96F86 508 aaKnown RBP23.68■■□□□ 1.38
SMAD1-211ENST00000512019 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMAD1-211ENST00000512019 RAI14Q9P0K7 980 aa23.68■■□□□ 1.38
SMAD1-211ENST00000512019 ANGEL1Q9UNK9 670 aaKnown RBP23.68■■□□□ 1.38
SMAD1-211ENST00000512019 TRIM6-TRIM34B2RNG4 842 aa23.67■■□□□ 1.38
SMAD1-211ENST00000512019 SOX10P56693 466 aa23.67■■□□□ 1.38
SMAD1-211ENST00000512019 TMED8Q6PL24 325 aaPredicted RBP23.67■■□□□ 1.38
SMAD1-211ENST00000512019 KBTBD3Q8NAB2 608 aa23.67■■□□□ 1.38
SMAD1-211ENST00000512019 MTMR14Q8NCE2 650 aa23.67■■□□□ 1.38
SMAD1-211ENST00000512019 DEFB129Q9H1M3 183 aa23.67■■□□□ 1.38
SMAD1-211ENST00000512019 TTF2Q9UNY4 1162 aaKnown RBP23.67■■□□□ 1.38
SMAD1-211ENST00000512019 OTOFQ9HC10 1997 aa23.66■■□□□ 1.38
SMAD1-211ENST00000512019 CLRN2A0PK11 232 aa23.66■■□□□ 1.38
SMAD1-211ENST00000512019 LRRFIP1Q32MZ4 808 aaKnown RBP23.66■■□□□ 1.38
SMAD1-211ENST00000512019 CFAP100Q494V2 611 aa23.66■■□□□ 1.38
SMAD1-211ENST00000512019 LDLRAD1Q5T700 205 aa23.66■■□□□ 1.38
SMAD1-211ENST00000512019 SLF2Q8IX21 1173 aa23.66■■□□□ 1.38
SMAD1-211ENST00000512019 ZNF296Q8WUU4 475 aaPredicted RBP23.66■■□□□ 1.38
SMAD1-211ENST00000512019 PRMT6Q96LA8 375 aaPredicted RBP23.66■■□□□ 1.38
SMAD1-211ENST00000512019 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.66■■□□□ 1.38
SMAD1-211ENST00000512019 GSPT1P15170 499 aaKnown RBP23.65■■□□□ 1.38
SMAD1-211ENST00000512019 GSTO1P78417 241 aa23.65■■□□□ 1.38
SMAD1-211ENST00000512019 GRIK5Q16478 980 aa23.65■■□□□ 1.38
SMAD1-211ENST00000512019 FSD1Q9BTV5 496 aa23.65■■□□□ 1.38
SMAD1-211ENST00000512019 HDLBPQ00341 1268 aaKnown RBP23.64■■□□□ 1.37
SMAD1-211ENST00000512019 MECOMQ03112 1051 aa23.64■■□□□ 1.37
SMAD1-211ENST00000512019 ZSCAN25Q6NSZ9 544 aa23.64■■□□□ 1.37
SMAD1-211ENST00000512019 RILPL2Q969X0 211 aa23.64■■□□□ 1.37
SMAD1-211ENST00000512019 R3HDMLQ9H3Y0 253 aa23.64■■□□□ 1.37
SMAD1-211ENST00000512019 SPDYE2BA6NHP3 402 aa23.63■■□□□ 1.37
SMAD1-211ENST00000512019 SPDYE6P0CI01 402 aa23.63■■□□□ 1.37
SMAD1-211ENST00000512019 BMP2KLQ5H9B9 411 aa23.63■■□□□ 1.37
SMAD1-211ENST00000512019 SPRYD7Q5W111 196 aa23.63■■□□□ 1.37
SMAD1-211ENST00000512019 TICAM2Q86XR7 235 aa23.63■■□□□ 1.37
SMAD1-211ENST00000512019 NSUN4Q96CB9 384 aaKnown RBP23.63■■□□□ 1.37
SMAD1-211ENST00000512019 SERPINA10Q9UK55 444 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms