RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GTF3C3Q9Y5Q9 886 aa7.28□□□□□ -1.24
RNF4-217ENST00000511892 COL1A1P02452 1464 aaPredicted RBP7.28□□□□□ -1.24
RNF4-217ENST00000511892 KIF16BQ96L93 1317 aa7.27□□□□□ -1.24
RNF4-217ENST00000511892 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
RNF4-217ENST00000511892 CLRN2A0PK11 232 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 CA12O43570 354 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 CIAO1O76071 339 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 TRIM27P14373 513 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 HNRNPUQ00839 825 aaKnown RBP eCLIP7.27□□□□□ -1.25
RNF4-217ENST00000511892 CHAF1AQ13111 956 aaPredicted RBP7.27□□□□□ -1.25
RNF4-217ENST00000511892 PRKG1Q13976 671 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 PUM3Q15397 648 aaKnown RBP7.27□□□□□ -1.25
RNF4-217ENST00000511892 GPR153Q6NV75 609 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 VPS37DQ86XT2 251 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 CSRNP1Q96S65 589 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 SIL1Q9H173 461 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 COPRSQ9NQ92 184 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 FZD1Q9UP38 647 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 PA2G4Q9UQ80 394 aaKnown RBP7.27□□□□□ -1.25
RNF4-217ENST00000511892 ZBED9Q6R2W3 1325 aa7.27□□□□□ -1.25
RNF4-217ENST00000511892 HTTP42858 3142 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 IFIT1P09914 478 aaKnown RBP7.26□□□□□ -1.25
RNF4-217ENST00000511892 SLC5A1P13866 664 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 CRKP46108 304 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 RBM5P52756 815 aaKnown RBP eCLIP7.26□□□□□ -1.25
RNF4-217ENST00000511892 TTLL12Q14166 644 aaPredicted RBP7.26□□□□□ -1.25
RNF4-217ENST00000511892 CAVIN4Q5BKX8 364 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 LDLRAD1Q5T700 205 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 NBPF12Q5TAG4 269 aaPredicted RBP7.26□□□□□ -1.25
RNF4-217ENST00000511892 ATF7IPQ6VMQ6 1270 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 DZIP1LQ8IYY4 767 aaKnown RBP7.26□□□□□ -1.25
RNF4-217ENST00000511892 LPIN2Q92539 896 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 VEZTQ9HBM0 779 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 RNF186Q9NXI6 227 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 ZNF70Q9UC06 446 aaPredicted RBP7.26□□□□□ -1.25
RNF4-217ENST00000511892 SERPINA10Q9UK55 444 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
RNF4-217ENST00000511892 CDK5RAP2Q96SN8 1893 aa7.26□□□□□ -1.25
RNF4-217ENST00000511892 BRCA2P51587 3418 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 IPO8O15397 1037 aaKnown RBP7.25□□□□□ -1.25
RNF4-217ENST00000511892 MYO1BO43795 1136 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 FRAT2O75474 233 aaPredicted RBP7.25□□□□□ -1.25
RNF4-217ENST00000511892 TRPA1O75762 1119 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 GNAI3P08754 354 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 ADORA1P30542 326 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 NF2P35240 595 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 IL15P40933 162 aaPredicted RBP7.25□□□□□ -1.25
RNF4-217ENST00000511892 MTX1Q13505 466 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 RASA3Q14644 834 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 MAP3K11Q16584 847 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 ARMC9Q7Z3E5 817 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 ZNF687Q8N1G0 1237 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 TMEM57Q8N5G2 664 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 TBC1D22AQ8WUA7 517 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 FRAT1Q92837 279 aaPredicted RBP7.25□□□□□ -1.25
RNF4-217ENST00000511892 CLUAP1Q96AJ1 413 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 TEPSINQ96N21 525 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 TDRD3Q9H7E2 651 aaKnown RBP7.25□□□□□ -1.25
RNF4-217ENST00000511892 SAGE1Q9NXZ1 904 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 CEP126Q9P2H0 1117 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 ANGEL1Q9UNK9 670 aaKnown RBP7.25□□□□□ -1.25
RNF4-217ENST00000511892 PPP2R3BQ9Y5P8 575 aa7.25□□□□□ -1.25
RNF4-217ENST00000511892 DOCK2Q92608 1830 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 SRGAP3O43295 1099 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 USP2O75604 605 aaPredicted RBP7.24□□□□□ -1.25
RNF4-217ENST00000511892 PHKA1P46020 1223 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 TM4SF4P48230 202 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 HDLBPQ00341 1268 aaKnown RBP7.24□□□□□ -1.25
RNF4-217ENST00000511892 ATP2B3Q16720 1220 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 ZKSCAN2Q63HK3 967 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 APOBEC3HQ6NTF7 200 aaKnown RBP7.24□□□□□ -1.25
RNF4-217ENST00000511892 TEKT1Q969V4 418 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 ABHD8Q96I13 439 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 CLMNQ96JQ2 1002 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 ZDHHC15Q96MV8 337 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 MRIQ9BWK5 157 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 HDAC5Q9UQL6 1122 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 SUGT1Q9Y2Z0 365 aa7.24□□□□□ -1.25
RNF4-217ENST00000511892 FOCADQ5VW36 1801 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 PHIPQ8WWQ0 1821 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 PNMA6EA0A0J9YXQ4 647 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 TCP10L2B9ZVM9 353 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 GNAI2P04899 355 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 RLBP1P12271 317 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 CACNB3P54284 484 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 TIMM10P62072 90 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 TFCP2Q12800 502 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 SUPT20HL1Q3ZLR7 823 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 SPRYD7Q5W111 196 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 CCDC102BQ68D86 513 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 WDR66Q8TBY9 1149 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 WNK4Q96J92 1243 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 TMEM39BQ9GZU3 492 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 PTPRFP10586 1907 aa7.23□□□□□ -1.25
RNF4-217ENST00000511892 A0A1B0GUL7 405 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 UNCXA6NJT0 531 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 ZBTB7BO15156 539 aaPredicted RBP7.22□□□□□ -1.25
RNF4-217ENST00000511892 PPP1R12BO60237 982 aaPredicted RBP7.22□□□□□ -1.25
RNF4-217ENST00000511892 TBC1D8O95759 1140 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 PRDX5P30044 214 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms