RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CNNM1Q9NRU3 951 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 TMOD2Q9NZR1 351 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 STXBP5LQ9Y2K9 1186 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 CHMP3Q9Y3E7 222 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 ADGRA2Q96PE1 1338 aa14.71□□□□□ -0.05
RNF4-216ENST00000511859 PRKCZQ05513 592 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 TAF7LQ5H9L4 462 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 DEFB123Q8N688 67 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 PXYLP1Q8TE99 480 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 TBC1D22AQ8WUA7 517 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 TEKT1Q969V4 418 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 GDF15Q99988 308 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 KCNH4Q9UQ05 1017 aa14.71□□□□□ -0.06
RNF4-216ENST00000511859 DOCK3Q8IZD9 2030 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 ADCY3O60266 1144 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 BCRP11274 1271 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 GYG1P46976 350 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 FLIIQ13045 1269 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 PARK7Q99497 189 aaKnown RBP14.7□□□□□ -0.06
RNF4-216ENST00000511859 AK9Q5TCS8 1911 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 VCANP13611 3396 aa14.7□□□□□ -0.06
RNF4-216ENST00000511859 CACNB3P54284 484 aa14.69□□□□□ -0.06
RNF4-216ENST00000511859 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
RNF4-216ENST00000511859 LRIT3Q3SXY7 679 aa14.69□□□□□ -0.06
RNF4-216ENST00000511859 LMBR1LQ6UX01 489 aa14.69□□□□□ -0.06
RNF4-216ENST00000511859 ZDHHC15Q96MV8 337 aa14.69□□□□□ -0.06
RNF4-216ENST00000511859 MOGSQ13724 837 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 TWISTNBQ3B726 338 aaPredicted RBP14.68□□□□□ -0.06
RNF4-216ENST00000511859 MIGA2Q7L4E1 593 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 NECAB2Q7Z6G3 386 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 VPS37DQ86XT2 251 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 PAWRQ96IZ0 340 aaKnown RBP14.68□□□□□ -0.06
RNF4-216ENST00000511859 ZNF594Q96JF6 807 aaPredicted RBP14.68□□□□□ -0.06
RNF4-216ENST00000511859 DEFB118Q96PH6 123 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 CRISPLD2Q9H0B8 497 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 PAK6Q9NQU5 681 aaPredicted RBP14.68□□□□□ -0.06
RNF4-216ENST00000511859 ZNF112Q9UJU3 913 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 GABRQQ9UN88 632 aa14.68□□□□□ -0.06
RNF4-216ENST00000511859 CXCL11O14625 94 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 INPP5BP32019 993 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 FLT3LGP49771 235 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 IRF5Q13568 498 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 APOBEC3HQ6NTF7 200 aaKnown RBP14.67□□□□□ -0.06
RNF4-216ENST00000511859 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 SUGT1Q9Y2Z0 365 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 RPAP1Q9BWH6 1393 aaPredicted RBP14.67□□□□□ -0.06
RNF4-216ENST00000511859 ALPK3Q96L96 1907 aa14.67□□□□□ -0.06
RNF4-216ENST00000511859 MAST3O60307 1309 aa14.66□□□□□ -0.06
RNF4-216ENST00000511859 FRAT2O75474 233 aaPredicted RBP14.66□□□□□ -0.06
RNF4-216ENST00000511859 INHAP05111 366 aa14.66□□□□□ -0.06
RNF4-216ENST00000511859 GRIK5Q16478 980 aa14.66□□□□□ -0.06
RNF4-216ENST00000511859 HHIPL2Q6UWX4 724 aa14.66□□□□□ -0.06
RNF4-216ENST00000511859 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
RNF4-216ENST00000511859 COL25A1Q9BXS0 654 aaPredicted RBP14.66□□□□□ -0.06
RNF4-216ENST00000511859 MTMR10Q9NXD2 777 aa14.66□□□□□ -0.06
RNF4-216ENST00000511859 LAMA2P24043 3122 aaKnown RBP14.65□□□□□ -0.06
RNF4-216ENST00000511859 CYP2C8P10632 490 aa14.65□□□□□ -0.06
RNF4-216ENST00000511859 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
RNF4-216ENST00000511859 NOL9Q5SY16 702 aaKnown RBP14.65□□□□□ -0.06
RNF4-216ENST00000511859 GPAT2Q6NUI2 795 aa14.65□□□□□ -0.06
RNF4-216ENST00000511859 FASTKD5Q7L8L6 764 aaKnown RBP14.65□□□□□ -0.06
RNF4-216ENST00000511859 FAM151AQ8WW52 585 aa14.65□□□□□ -0.06
RNF4-216ENST00000511859 ELNP15502 786 aa14.64□□□□□ -0.07
RNF4-216ENST00000511859 Q7L0L9 218 aa14.64□□□□□ -0.07
RNF4-216ENST00000511859 TSR2Q969E8 191 aaKnown RBP14.64□□□□□ -0.07
RNF4-216ENST00000511859 SLC45A1Q9Y2W3 748 aa14.64□□□□□ -0.07
RNF4-216ENST00000511859 MROH5Q6ZUA9 1318 aa14.63□□□□□ -0.07
RNF4-216ENST00000511859 TNPO2O14787 897 aaKnown RBP14.63□□□□□ -0.07
RNF4-216ENST00000511859 BCAMP50895 628 aa14.63□□□□□ -0.07
RNF4-216ENST00000511859 CHAF1AQ13111 956 aaPredicted RBP14.63□□□□□ -0.07
RNF4-216ENST00000511859 EPHA10Q5JZY3 1008 aa14.63□□□□□ -0.07
RNF4-216ENST00000511859 BEND3Q5T5X7 828 aa14.63□□□□□ -0.07
RNF4-216ENST00000511859 TDHQ8IZJ6 230 aa14.63□□□□□ -0.07
RNF4-216ENST00000511859 IQSEC3Q9UPP2 1182 aaPredicted RBP14.63□□□□□ -0.07
RNF4-216ENST00000511859 GRM8O00222 908 aa14.62□□□□□ -0.07
RNF4-216ENST00000511859 COA7Q96BR5 231 aa14.62□□□□□ -0.07
RNF4-216ENST00000511859 NBPF3Q9H094 633 aa14.62□□□□□ -0.07
RNF4-216ENST00000511859 C7orf61Q8IZ16 206 aa14.61□□□□□ -0.07
RNF4-216ENST00000511859 PUS3Q9BZE2 481 aaKnown RBP14.61□□□□□ -0.07
RNF4-216ENST00000511859 ZMYND8Q9ULU4 1186 aaPredicted RBP14.61□□□□□ -0.07
RNF4-216ENST00000511859 A0A0G2JLL6 359 aaPredicted RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 PRRT2Q7Z6L0 340 aaPredicted RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.6□□□□□ -0.07
RNF4-216ENST00000511859 DIS3LQ8TF46 1054 aaKnown RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.6□□□□□ -0.07
RNF4-216ENST00000511859 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 ZHX2Q9Y6X8 837 aa14.6□□□□□ -0.07
RNF4-216ENST00000511859 MAGEA10P43363 369 aaPredicted RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 TCP10Q12799 353 aa14.6□□□□□ -0.07
RNF4-216ENST00000511859 CCDC27Q2M243 656 aa14.6□□□□□ -0.07
RNF4-216ENST00000511859 SMCR8Q8TEV9 937 aaPredicted RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 UBE2OQ9C0C9 1292 aaKnown RBP14.6□□□□□ -0.07
RNF4-216ENST00000511859 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
RNF4-216ENST00000511859 AFG3L2Q9Y4W6 797 aa14.6□□□□□ -0.07
RNF4-216ENST00000511859 HMX1Q9NP08 348 aaPredicted RBP14.59□□□□□ -0.07
RNF4-216ENST00000511859 PICK1Q9NRD5 415 aa14.59□□□□□ -0.07
RNF4-216ENST00000511859 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 PRUNE2Q8WUY3 3088 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 F6X3S4 739 aa14.58□□□□□ -0.08
RNF4-216ENST00000511859 VAMP4O75379 141 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms