RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
COL12A1-210ENST00000511023 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
COL12A1-210ENST00000511023 MYH2Q9UKX2 1941 aa17.89■□□□□ 0.45
COL12A1-210ENST00000511023 CA12O43570 354 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 MECOMQ03112 1051 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 NFIAQ12857 509 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 SPTY2D1Q68D10 685 aaPredicted RBP17.88■□□□□ 0.45
COL12A1-210ENST00000511023 DZIP1Q86YF9 867 aaKnown RBP17.88■□□□□ 0.45
COL12A1-210ENST00000511023 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.88■□□□□ 0.45
COL12A1-210ENST00000511023 SNRKQ9NRH2 765 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 AKAP11Q9UKA4 1901 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 OTOFQ9HC10 1997 aa17.88■□□□□ 0.45
COL12A1-210ENST00000511023 TTC39AQ5SRH9 613 aa17.87■□□□□ 0.45
COL12A1-210ENST00000511023 SPRYD7Q5W111 196 aa17.87■□□□□ 0.45
COL12A1-210ENST00000511023 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
COL12A1-210ENST00000511023 FAM163AQ96GL9 167 aaPredicted RBP17.87■□□□□ 0.45
COL12A1-210ENST00000511023 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
COL12A1-210ENST00000511023 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
COL12A1-210ENST00000511023 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
COL12A1-210ENST00000511023 FAM198AQ9UFP1 575 aa17.87■□□□□ 0.45
COL12A1-210ENST00000511023 IREB2P48200 963 aaKnown RBP17.86■□□□□ 0.45
COL12A1-210ENST00000511023 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
COL12A1-210ENST00000511023 IFFO2Q5TF58 517 aa17.86■□□□□ 0.45
COL12A1-210ENST00000511023 TNS4Q8IZW8 715 aa17.86■□□□□ 0.45
COL12A1-210ENST00000511023 NSUN4Q96CB9 384 aaKnown RBP17.86■□□□□ 0.45
COL12A1-210ENST00000511023 SLC10A4Q96EP9 437 aa17.86■□□□□ 0.45
COL12A1-210ENST00000511023 ZNF512BQ96KM6 892 aaPredicted RBP17.86■□□□□ 0.45
COL12A1-210ENST00000511023 RFX7Q2KHR2 1363 aa17.86■□□□□ 0.45
COL12A1-210ENST00000511023 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
COL12A1-210ENST00000511023 MROH7-TTC4A0A0A0MT08 1334 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 UNCXA6NJT0 531 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 TRPA1O75762 1119 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 GJA5P36382 358 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 TCP10Q12799 353 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.85■□□□□ 0.45
COL12A1-210ENST00000511023 ERC1Q8IUD2 1116 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 ZFPM1Q8IX07 1006 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 FAM151AQ8WW52 585 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 WNK4Q96J92 1243 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 SAGE1Q9NXZ1 904 aa17.85■□□□□ 0.45
COL12A1-210ENST00000511023 HMMRO75330 724 aa17.84■□□□□ 0.45
COL12A1-210ENST00000511023 CYP2E1P05181 493 aaPredicted RBP17.84■□□□□ 0.45
COL12A1-210ENST00000511023 BTDP43251 543 aa17.84■□□□□ 0.45
COL12A1-210ENST00000511023 TM4SF4P48230 202 aa17.84■□□□□ 0.45
COL12A1-210ENST00000511023 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
COL12A1-210ENST00000511023 ANKRD13AQ8IZ07 590 aa17.84■□□□□ 0.45
COL12A1-210ENST00000511023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL12A1-210ENST00000511023 CHMP4BQ9H444 224 aaKnown RBP17.84■□□□□ 0.45
COL12A1-210ENST00000511023 GPR75-ASB3A0A0A6YYF3 556 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 APBB1O00213 710 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 WDHD1O75717 1129 aaPredicted RBP17.83■□□□□ 0.44
COL12A1-210ENST00000511023 ZAP70P43403 619 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 RHBDL3P58872 404 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 HSP90AB4PQ58FF6 505 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 AACSQ86V21 672 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 SLF2Q8IX21 1173 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 IDI2Q9BXS1 227 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 ELP3Q9H9T3 547 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 RAI14Q9P0K7 980 aa17.83■□□□□ 0.44
COL12A1-210ENST00000511023 MYO5AQ9Y4I1 1855 aaKnown RBP17.82■□□□□ 0.44
COL12A1-210ENST00000511023 RGS3P49796 1198 aa17.82■□□□□ 0.44
COL12A1-210ENST00000511023 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
COL12A1-210ENST00000511023 VGLL4Q14135 290 aa17.82■□□□□ 0.44
COL12A1-210ENST00000511023 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
COL12A1-210ENST00000511023 DDX4Q9NQI0 724 aaKnown RBP17.82■□□□□ 0.44
COL12A1-210ENST00000511023 PIH1D3Q9NQM4 214 aaKnown RBP17.82■□□□□ 0.44
COL12A1-210ENST00000511023 LRP2BPQ9P2M1 347 aa17.82■□□□□ 0.44
COL12A1-210ENST00000511023 NDUFB9Q9Y6M9 179 aa17.82■□□□□ 0.44
COL12A1-210ENST00000511023 LAMB1P07942 1786 aa17.81■□□□□ 0.44
COL12A1-210ENST00000511023 CASP8AP2Q9UKL3 1982 aa17.81■□□□□ 0.44
COL12A1-210ENST00000511023 ZBTB48P10074 688 aaPredicted RBP17.81■□□□□ 0.44
COL12A1-210ENST00000511023 RRP1P56182 461 aaKnown RBP17.81■□□□□ 0.44
COL12A1-210ENST00000511023 MIGA2Q7L4E1 593 aa17.81■□□□□ 0.44
COL12A1-210ENST00000511023 SH3BP5LQ7L8J4 393 aa17.81■□□□□ 0.44
COL12A1-210ENST00000511023 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
COL12A1-210ENST00000511023 ATRNL1Q5VV63 1379 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 ENTPD3O75355 529 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 LDHCP07864 332 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 GSTO1P78417 241 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 ZKSCAN4Q969J2 545 aaPredicted RBP17.8■□□□□ 0.44
COL12A1-210ENST00000511023 OPTNQ96CV9 577 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 SNCAIPQ9Y6H5 919 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 MAST2Q6P0Q8 1798 aa17.8■□□□□ 0.44
COL12A1-210ENST00000511023 MANSC4A6NHS7 340 aaPredicted RBP17.79■□□□□ 0.44
COL12A1-210ENST00000511023 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
COL12A1-210ENST00000511023 SREBF2Q12772 1141 aa17.79■□□□□ 0.44
COL12A1-210ENST00000511023 ADGRA1Q86SQ6 560 aa17.79■□□□□ 0.44
COL12A1-210ENST00000511023 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
COL12A1-210ENST00000511023 WRNIP1Q96S55 665 aa17.79■□□□□ 0.44
COL12A1-210ENST00000511023 DDTLA6NHG4 134 aaPredicted RBP17.78■□□□□ 0.44
COL12A1-210ENST00000511023 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
COL12A1-210ENST00000511023 INPP5BP32019 993 aa17.78■□□□□ 0.44
COL12A1-210ENST00000511023 PICALMQ13492 652 aa17.78■□□□□ 0.44
COL12A1-210ENST00000511023 DCAF15Q66K64 600 aa17.78■□□□□ 0.44
COL12A1-210ENST00000511023 NAA16Q6N069 864 aaPredicted RBP17.78■□□□□ 0.44
COL12A1-210ENST00000511023 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
COL12A1-210ENST00000511023 ZNF341Q9BYN7 854 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms