RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 SMC1BQ8NDV3 1235 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 ZNF384Q8TF68 577 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 DPF2Q92785 391 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 TMX4Q9H1E5 349 aaPredicted RBP8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 ADARB2Q9NS39 739 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 CNOT7Q9UIV1 285 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 TRPM7Q96QT4 1865 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 MYO5AQ9Y4I1 1855 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 OTOFQ9HC10 1997 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 RFX7Q2KHR2 1363 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 A0A1B0GUL7 405 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 DPYSL4O14531 572 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 RPS12P25398 132 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 IL15P40933 162 aaPredicted RBP8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 FSTL1Q12841 308 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 TNIP1Q15025 636 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 ATP2B3Q16720 1220 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 KIF4BQ2VIQ3 1234 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 KIAA0825Q8IV33 1275 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 GLIS2Q9BZE0 524 aaPredicted RBP8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 EXOC6BQ9Y2D4 811 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 PCDHB15Q9Y5E8 787 aa8.96□□□□□ -0.98
TOPBP1-207ENST00000509162 HIBADHP31937 336 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 RASGRF1Q13972 1273 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 USP50Q70EL3 339 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 ZNF804AQ7Z570 1209 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 AGBL3Q8NEM8 1001 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 LPIN2Q92539 896 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 FBXW7Q969H0 707 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 DBNDD2Q9BQY9 259 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 GGA3Q9NZ52 723 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 DBNLQ9UJU6 430 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 DDX19BQ9UMR2 479 aa8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 POLR2AP24928 1970 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-207ENST00000509162 DDX60LQ5H9U9 1706 aaKnown RBP8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 F8W031 263 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 TK2O00142 265 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 LMOD1P29536 600 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 TIMM10P62072 90 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 PDE4DQ08499 809 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 CHAF1AQ13111 956 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 TNNI3KQ59H18 835 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 CCDC102BQ68D86 513 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 TTLL5Q6EMB2 1281 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 DNAJC5GQ8N7S2 189 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 EAF2Q96CJ1 260 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 XAGE2Q96GT9 111 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 MYOZ2Q9NPC6 264 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 FPGT-TNNI3KV9GXZ4 949 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 SIPA1L1O43166 1804 aa8.94□□□□□ -0.98
TOPBP1-207ENST00000509162 WNT10BO00744 389 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 USP17L8P0C7I0 530 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 SLC5A1P13866 664 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 PRDX5P30044 214 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 FKBP1AP62942 108 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 CST9Q5W186 159 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 C16orf71Q8IYS4 520 aaPredicted RBP8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 CNTROBQ8N137 903 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 MYO3BQ8WXR4 1341 aa8.93□□□□□ -0.98
TOPBP1-207ENST00000509162 CDK5RAP2Q96SN8 1893 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 CNTNAP1P78357 1384 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 SURF6O75683 361 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 ARID4AP29374 1257 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 MCAMP43121 646 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 APLP1P51693 650 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 MFSD14BQ5SR56 506 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 ANGEL2Q5VTE6 544 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 ADGRD1Q6QNK2 874 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 PNMA8AQ86V59 439 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 IL1RAPL2Q9NP60 686 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 HMG20BQ9P0W2 317 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 CEP126Q9P2H0 1117 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 NDUFB9Q9Y6M9 179 aa8.92□□□□□ -0.98
TOPBP1-207ENST00000509162 LAMB1P07942 1786 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 PDS5AQ29RF7 1337 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 SALL1Q9NSC2 1324 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 SMARCA5O60264 1052 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 EVI5O60447 810 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 FOSBP53539 338 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 DIXDC1Q155Q3 683 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 CFAP100Q494V2 611 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 PRAMEF18Q5VWM3 479 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 USP48Q86UV5 1035 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 ZNF454Q8N9F8 522 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 MTMR14Q8NCE2 650 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 EXOC6Q8TAG9 804 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 PRMT6Q96LA8 375 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 FZD1Q9UP38 647 aa8.91□□□□□ -0.98
TOPBP1-207ENST00000509162 ATRNL1Q5VV63 1379 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 SALL3Q9BXA9 1300 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 PITPNM2Q9BZ72 1349 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms