RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 POTEB2H3BUK9 544 aa16.4■□□□□ 0.22
TRIM41-204ENST00000508930 FANCGO15287 622 aa16.4■□□□□ 0.22
TRIM41-204ENST00000508930 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
TRIM41-204ENST00000508930 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
TRIM41-204ENST00000508930 AIFM3Q96NN9 605 aa16.4■□□□□ 0.22
TRIM41-204ENST00000508930 IRX2Q9BZI1 471 aaPredicted RBP16.4■□□□□ 0.22
TRIM41-204ENST00000508930 KCNH3Q9ULD8 1083 aa16.4■□□□□ 0.22
TRIM41-204ENST00000508930 ZNF569Q5MCW4 686 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 H3BQF6 201 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 APPP05067 770 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 C19orf44Q9H6X5 657 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
TRIM41-204ENST00000508930 KLHL10Q6JEL2 608 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 TTC5Q8N0Z6 440 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 TUBE1Q9UJT0 475 aa16.39■□□□□ 0.21
TRIM41-204ENST00000508930 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 ZNF827Q17R98 1081 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 RSRC2Q7L4I2 434 aaKnown RBP16.38■□□□□ 0.21
TRIM41-204ENST00000508930 SRGAP1Q7Z6B7 1085 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 ZNF213O14771 459 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 SRLQ86TD4 932 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 CDKL5O76039 1030 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM41-204ENST00000508930 LONRF3Q496Y0 759 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 KRT40Q6A162 431 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 FAN1Q9Y2M0 1017 aa16.38■□□□□ 0.21
TRIM41-204ENST00000508930 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
TRIM41-204ENST00000508930 MYO1BO43795 1136 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 GTF2A1P52655 376 aaPredicted RBP16.37■□□□□ 0.21
TRIM41-204ENST00000508930 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 GBP3Q9H0R5 595 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 RAI14Q9P0K7 980 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 EFCC1Q9HA90 598 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 M0R2C6 588 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 MTF1Q14872 753 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 HSD3B7Q9H2F3 369 aa16.37■□□□□ 0.21
TRIM41-204ENST00000508930 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.36■□□□□ 0.21
TRIM41-204ENST00000508930 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIM41-204ENST00000508930 PHKBQ93100 1093 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 RFX5P48382 616 aaPredicted RBP16.36■□□□□ 0.21
TRIM41-204ENST00000508930 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
TRIM41-204ENST00000508930 TC2NQ8N9U0 490 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 CTAGE9A4FU28 777 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 SOWAHDA6NJG2 315 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 CUTAO60888 179 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 PDE4BQ07343 736 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 TTC31Q49AM3 519 aaPredicted RBP16.36■□□□□ 0.21
TRIM41-204ENST00000508930 ZNF790Q6PG37 636 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 UBXN6Q9BZV1 441 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 CDC23Q9UJX2 597 aa16.36■□□□□ 0.21
TRIM41-204ENST00000508930 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 FOXN1O15353 648 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
TRIM41-204ENST00000508930 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
TRIM41-204ENST00000508930 PSD3Q9NYI0 1048 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 A0A1B0GUL7 405 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 MRPL44Q9H9J2 332 aaKnown RBP16.35■□□□□ 0.21
TRIM41-204ENST00000508930 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 NEDD4P46934 1319 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 FGAP02671 866 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
TRIM41-204ENST00000508930 PDIA6Q15084 440 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
TRIM41-204ENST00000508930 ANKARQ7Z5J8 1434 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 PPP6R2O75170 966 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 CEBPAP49715 358 aaPredicted RBP16.34■□□□□ 0.21
TRIM41-204ENST00000508930 KRI1Q8N9T8 703 aaKnown RBP16.34■□□□□ 0.21
TRIM41-204ENST00000508930 STX17P56962 302 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
TRIM41-204ENST00000508930 TMEM139Q8IV31 216 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 IGSF22Q8N9C0 903 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 POLR2DO15514 142 aaKnown RBP16.34■□□□□ 0.21
TRIM41-204ENST00000508930 POSTNQ15063 836 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
TRIM41-204ENST00000508930 SUGCTQ9HAC7 445 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 SAMSN1Q9NSI8 373 aaKnown RBP16.34■□□□□ 0.21
TRIM41-204ENST00000508930 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
TRIM41-204ENST00000508930 ANKRD65E5RJM6 399 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms