RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 AKAP2Q9Y2D5 859 aa9.83□□□□□ -0.84
CCSER1-207ENST00000508550 RFX7Q2KHR2 1363 aa9.83□□□□□ -0.84
CCSER1-207ENST00000508550 SH3TC1Q8TE82 1336 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 ITGB4P16144 1822 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 SASH1O94885 1247 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 GMPRP36959 345 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 IFIT5Q13325 482 aaKnown RBP9.82□□□□□ -0.84
CCSER1-207ENST00000508550 SH3D19Q5HYK7 790 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 EPHA10Q5JZY3 1008 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 PPP2R2DQ66LE6 453 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 C16orf71Q8IYS4 520 aaPredicted RBP9.82□□□□□ -0.84
CCSER1-207ENST00000508550 EVI5LQ96CN4 794 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 ZNF512BQ96KM6 892 aaPredicted RBP9.82□□□□□ -0.84
CCSER1-207ENST00000508550 C22orf23Q9BZE7 217 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 ABCC12Q96J65 1359 aa9.82□□□□□ -0.84
CCSER1-207ENST00000508550 IRS4O14654 1257 aaPredicted RBP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 SMARCA5O60264 1052 aaPredicted RBP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 ATP5JP18859 108 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 CTSWP56202 376 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 ANAPC15P60006 121 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 BECN1Q14457 450 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 HLFQ16534 295 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 LINC00116Q8NCU8 138 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 SNRKQ9NRH2 765 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 TRMT112Q9UI30 125 aaKnown RBP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 CCNL1Q9UK58 526 aaPredicted RBP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 RTCBQ9Y3I0 505 aaKnown RBP9.81□□□□□ -0.84
CCSER1-207ENST00000508550 DOT1LQ8TEK3 1739 aa9.81□□□□□ -0.84
CCSER1-207ENST00000508550 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
CCSER1-207ENST00000508550 SSFA2P28290 1259 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 SF3B3Q15393 1217 aaKnown RBP9.8□□□□□ -0.84
CCSER1-207ENST00000508550 LRRFIP1Q32MZ4 808 aaKnown RBP9.8□□□□□ -0.84
CCSER1-207ENST00000508550 CCDC152Q4G0S7 254 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 VASH1Q7L8A9 365 aaPredicted RBP9.8□□□□□ -0.84
CCSER1-207ENST00000508550 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 FBXO41Q8TF61 875 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 SNX21Q969T3 373 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 KDM4CQ9H3R0 1056 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 RAD50Q92878 1312 aa9.8□□□□□ -0.84
CCSER1-207ENST00000508550 TJP1Q07157 1748 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 ARFGEF2Q9Y6D5 1785 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 RXRBP28702 533 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 VEGFBP49765 207 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 TMED8Q6PL24 325 aaPredicted RBP9.79□□□□□ -0.84
CCSER1-207ENST00000508550 ATG9AQ7Z3C6 839 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 FLAD1Q8NFF5 587 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 EAF2Q96CJ1 260 aaPredicted RBP9.79□□□□□ -0.84
CCSER1-207ENST00000508550 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 TBC1D2BQ9UPU7 963 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 RIC1Q4ADV7 1423 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 MROH5Q6ZUA9 1318 aa9.79□□□□□ -0.84
CCSER1-207ENST00000508550 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 NTSR2O95665 410 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 FSHRP23945 695 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 CHMLP26374 656 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 TPTE2Q6XPS3 522 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 AACSQ86V21 672 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 PROCA1Q8NCQ7 364 aaPredicted RBP9.78□□□□□ -0.84
CCSER1-207ENST00000508550 OTUD7AQ8TE49 926 aaPredicted RBP9.78□□□□□ -0.84
CCSER1-207ENST00000508550 FAM89AQ96GI7 184 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 FAM117AQ9C073 453 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 IL1RAPL2Q9NP60 686 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 FKBPLQ9UIM3 349 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 PA2G4Q9UQ80 394 aaKnown RBP9.78□□□□□ -0.84
CCSER1-207ENST00000508550 NIP7Q9Y221 180 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCSER1-207ENST00000508550 RIPOR2Q9Y4F9 1068 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 UBN2Q6ZU65 1347 aa9.78□□□□□ -0.84
CCSER1-207ENST00000508550 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 APBB1O00213 710 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 ITGA6P23229 1130 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 MCCP23508 829 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 SUSD4Q5VX71 490 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 CCDC116Q8IYX3 515 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 LINC00528Q8N1L1 170 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 SETDB2Q96T68 719 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 CDC5LQ99459 802 aaKnown RBP9.77□□□□□ -0.85
CCSER1-207ENST00000508550 HAUS7Q99871 368 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
CCSER1-207ENST00000508550 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
CCSER1-207ENST00000508550 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.85
CCSER1-207ENST00000508550 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
CCSER1-207ENST00000508550 UPP2O95045 317 aa9.76□□□□□ -0.85
CCSER1-207ENST00000508550 MCM2P49736 904 aa9.76□□□□□ -0.85
CCSER1-207ENST00000508550 TFCP2Q12800 502 aa9.76□□□□□ -0.85
CCSER1-207ENST00000508550 RABEP1Q15276 862 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms