RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ZBTB48P10074 688 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 CRKP46108 304 aa8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 RBM5P52756 815 aaKnown RBP eCLIP8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 SREBF2Q12772 1141 aa8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 SUPT20HL1Q3ZLR7 823 aa8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 ATG9AQ7Z3C6 839 aa8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 TMEM39BQ9GZU3 492 aa8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P16-201ENST00000508308 TESPA1A2RU30 521 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 MANSC4A6NHS7 340 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 SPDYE4A6NLX3 237 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 TCP10L2B9ZVM9 353 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 MYO1BO43795 1136 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 PPP1R12BO60237 982 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 FKTNO75072 461 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 HOXB3P14651 431 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 CACNB3P54284 484 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 INHBEP58166 350 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 CHAF1AQ13111 956 aaPredicted RBP8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 METTL24Q5JXM2 366 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 APOBEC3HQ6NTF7 200 aaKnown RBP8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 MS4A4AQ96JQ5 239 aa8.09□□□□□ -1.11
HMGN1P16-201ENST00000508308 KIAA0100Q14667 2235 aaKnown RBP8.09□□□□□ -1.12
HMGN1P16-201ENST00000508308 KIF16BQ96L93 1317 aa8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 EYA2O00167 538 aa8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 IREB2P48200 963 aaKnown RBP8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 CRHR2Q13324 411 aa8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 PKN2Q16513 984 aaKnown RBP8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 ANKRD13AQ8IZ07 590 aa8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 MRIQ9BWK5 157 aa8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 ELP3Q9H9T3 547 aa8.08□□□□□ -1.12
HMGN1P16-201ENST00000508308 SLC34A2O95436 690 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 ALDH1A1P00352 501 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 TNFAIP1Q13829 316 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 VGLL4Q14135 290 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 PUM3Q15397 648 aaKnown RBP8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 FBXO46Q6PJ61 603 aaPredicted RBP8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 OTOP1Q7RTM1 612 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 TBC1D22AQ8WUA7 517 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 BRI3BPQ8WY22 251 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 ZDHHC15Q96MV8 337 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 SMC4Q9NTJ3 1288 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 MYH13Q9UKX3 1938 aa8.07□□□□□ -1.12
HMGN1P16-201ENST00000508308 MAP3K9P80192 1104 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 VARS2Q5ST30 1063 aaKnown RBP8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 FKBP1CQ5VVH2 108 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 HHIPL2Q6UWX4 724 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 VPS37DQ86XT2 251 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 PDCD7Q8N8D1 485 aaKnown RBP8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 CD99L2Q8TCZ2 262 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 TEKT1Q969V4 418 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 PA2G4Q9UQ80 394 aaKnown RBP8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 ZSWIM8A7E2V4 1837 aa8.06□□□□□ -1.12
HMGN1P16-201ENST00000508308 IFIT1P09914 478 aaKnown RBP8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 PRDX5P30044 214 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 RARSP54136 660 aaKnown RBP8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 NFIAQ12857 509 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 FAM83AQ86UY5 434 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 FAM43AQ8N2R8 423 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 LPIN2Q92539 896 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 ZKSCAN4Q969J2 545 aaPredicted RBP8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 MEIS3Q99687 375 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 SIL1Q9H173 461 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 PTPN22Q9Y2R2 807 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 SUGT1Q9Y2Z0 365 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 DAGLAQ9Y4D2 1042 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 TRIM17Q9Y577 477 aa8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 LRRFIP2Q9Y608 721 aaKnown RBP8.05□□□□□ -1.12
HMGN1P16-201ENST00000508308 CCL15-CCL14A0A0B4J2E2 113 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 SPDYE5A6NIY4 337 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 FRAT2O75474 233 aaPredicted RBP8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 CIAO1O76071 339 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 UBTFL1P0CB47 393 aaPredicted RBP8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 SLC5A1P13866 664 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 ADORA1P30542 326 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 PHKA1P46020 1223 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 TNNI2P48788 182 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 CCL15Q16663 113 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 ATP2B3Q16720 1220 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 CDC42EP5Q6NZY7 148 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 ZFPM1Q8IX07 1006 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 WDR66Q8TBY9 1149 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 COPRSQ9NQ92 184 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 FAM198AQ9UFP1 575 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 FBXO3Q9UK99 471 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 TNNQ9UQP3 1299 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 RPAP1Q9BWH6 1393 aaPredicted RBP8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 CEP290O15078 2479 aa8.04□□□□□ -1.12
HMGN1P16-201ENST00000508308 RBBP6Q7Z6E9 1792 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms