RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TEPSINQ96N21 525 aa24.37■■□□□ 1.49
SFXN1-209ENST00000508290 MCAMP43121 646 aa24.36■■□□□ 1.49
SFXN1-209ENST00000508290 KIF23Q02241 960 aaPredicted RBP24.36■■□□□ 1.49
SFXN1-209ENST00000508290 MOB2Q70IA6 237 aa24.36■■□□□ 1.49
SFXN1-209ENST00000508290 CLASRPQ8N2M8 674 aaKnown RBP24.36■■□□□ 1.49
SFXN1-209ENST00000508290 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
SFXN1-209ENST00000508290 SAGE1Q9NXZ1 904 aa24.36■■□□□ 1.49
SFXN1-209ENST00000508290 TMED8Q6PL24 325 aaPredicted RBP24.35■■□□□ 1.49
SFXN1-209ENST00000508290 ANKRD13AQ8IZ07 590 aa24.35■■□□□ 1.49
SFXN1-209ENST00000508290 RHPN1Q8TCX5 695 aa24.35■■□□□ 1.49
SFXN1-209ENST00000508290 FAM151AQ8WW52 585 aa24.35■■□□□ 1.49
SFXN1-209ENST00000508290 EAF2Q96CJ1 260 aaPredicted RBP24.35■■□□□ 1.49
SFXN1-209ENST00000508290 TMEM39BQ9GZU3 492 aa24.35■■□□□ 1.49
SFXN1-209ENST00000508290 DBNLQ9UJU6 430 aaKnown RBP24.35■■□□□ 1.49
SFXN1-209ENST00000508290 MROH7-TTC4A0A0A0MT08 1334 aa24.35■■□□□ 1.49
SFXN1-209ENST00000508290 RRP1P56182 461 aaKnown RBP24.34■■□□□ 1.49
SFXN1-209ENST00000508290 PRKG1Q13976 671 aa24.34■■□□□ 1.49
SFXN1-209ENST00000508290 CDC42EP5Q6NZY7 148 aa24.34■■□□□ 1.49
SFXN1-209ENST00000508290 SIRT2Q8IXJ6 389 aa24.34■■□□□ 1.49
SFXN1-209ENST00000508290 LRP2BPQ9P2M1 347 aa24.34■■□□□ 1.49
SFXN1-209ENST00000508290 ZBTB48P10074 688 aaPredicted RBP24.33■■□□□ 1.49
SFXN1-209ENST00000508290 MECOMQ03112 1051 aa24.33■■□□□ 1.49
SFXN1-209ENST00000508290 DCAF15Q66K64 600 aa24.33■■□□□ 1.49
SFXN1-209ENST00000508290 SLC10A4Q96EP9 437 aa24.33■■□□□ 1.49
SFXN1-209ENST00000508290 IDI2Q9BXS1 227 aa24.33■■□□□ 1.49
SFXN1-209ENST00000508290 USP40Q9NVE5 1235 aa24.33■■□□□ 1.49
SFXN1-209ENST00000508290 USP2O75604 605 aaPredicted RBP24.32■■□□□ 1.48
SFXN1-209ENST00000508290 HSPA8P11142 646 aaKnown RBP24.32■■□□□ 1.48
SFXN1-209ENST00000508290 CACNB3P54284 484 aa24.32■■□□□ 1.48
SFXN1-209ENST00000508290 SREBF2Q12772 1141 aa24.32■■□□□ 1.48
SFXN1-209ENST00000508290 AACSQ86V21 672 aa24.32■■□□□ 1.48
SFXN1-209ENST00000508290 NSUN4Q96CB9 384 aaKnown RBP24.32■■□□□ 1.48
SFXN1-209ENST00000508290 RAI14Q9P0K7 980 aa24.32■■□□□ 1.48
SFXN1-209ENST00000508290 GPR75-ASB3A0A0A6YYF3 556 aa24.31■■□□□ 1.48
SFXN1-209ENST00000508290 ENTPD3O75355 529 aa24.31■■□□□ 1.48
SFXN1-209ENST00000508290 INHBEP58166 350 aa24.31■■□□□ 1.48
SFXN1-209ENST00000508290 IFFO2Q5TF58 517 aa24.31■■□□□ 1.48
SFXN1-209ENST00000508290 CCDC8Q9H0W5 538 aaPredicted RBP24.31■■□□□ 1.48
SFXN1-209ENST00000508290 NPM3O75607 178 aaKnown RBP24.3■■□□□ 1.48
SFXN1-209ENST00000508290 PI16Q6UXB8 463 aa24.3■■□□□ 1.48
SFXN1-209ENST00000508290 CSRNP1Q96S65 589 aa24.3■■□□□ 1.48
SFXN1-209ENST00000508290 LBX1P52954 281 aa24.29■■□□□ 1.48
SFXN1-209ENST00000508290 SPRYD7Q5W111 196 aa24.29■■□□□ 1.48
SFXN1-209ENST00000508290 ZIC5Q96T25 663 aa24.29■■□□□ 1.48
SFXN1-209ENST00000508290 NOL10Q9BSC4 688 aaKnown RBP24.29■■□□□ 1.48
SFXN1-209ENST00000508290 CSADQ9Y600 493 aa24.29■■□□□ 1.48
SFXN1-209ENST00000508290 MANSC4A6NHS7 340 aaPredicted RBP24.28■■□□□ 1.48
SFXN1-209ENST00000508290 IFIT2P09913 472 aaKnown RBP24.28■■□□□ 1.48
SFXN1-209ENST00000508290 BTDP43251 543 aa24.28■■□□□ 1.48
SFXN1-209ENST00000508290 COL13A1Q5TAT6 717 aaPredicted RBP24.28■■□□□ 1.48
SFXN1-209ENST00000508290 TBC1D9Q6ZT07 1266 aa24.28■■□□□ 1.48
SFXN1-209ENST00000508290 CERS3Q8IU89 383 aa24.28■■□□□ 1.48
SFXN1-209ENST00000508290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.28■■□□□ 1.48
SFXN1-209ENST00000508290 IL1RAPL2Q9NP60 686 aa24.28■■□□□ 1.48
SFXN1-209ENST00000508290 TLR7Q9NYK1 1049 aaKnown RBP24.28■■□□□ 1.48
SFXN1-209ENST00000508290 RFX7Q2KHR2 1363 aa24.28■■□□□ 1.48
SFXN1-209ENST00000508290 BAG3O95817 575 aa24.27■■□□□ 1.48
SFXN1-209ENST00000508290 CYP2E1P05181 493 aaPredicted RBP24.27■■□□□ 1.48
SFXN1-209ENST00000508290 PLCG2P16885 1265 aa24.27■■□□□ 1.48
SFXN1-209ENST00000508290 TM4SF4P48230 202 aa24.27■■□□□ 1.48
SFXN1-209ENST00000508290 MAP3K9P80192 1104 aa24.27■■□□□ 1.48
SFXN1-209ENST00000508290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.27■■□□□ 1.48
SFXN1-209ENST00000508290 SNRKQ9NRH2 765 aa24.27■■□□□ 1.48
SFXN1-209ENST00000508290 ZAP70P43403 619 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 NFIAQ12857 509 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 AAMPQ13685 434 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 NAA16Q6N069 864 aaPredicted RBP24.26■■□□□ 1.47
SFXN1-209ENST00000508290 WNK4Q96J92 1243 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 ZNF341Q9BYN7 854 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 LRRCC1Q9C099 1032 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 FAM198AQ9UFP1 575 aa24.26■■□□□ 1.47
SFXN1-209ENST00000508290 ALDH1A1P00352 501 aa24.25■■□□□ 1.47
SFXN1-209ENST00000508290 TCP10Q12799 353 aa24.25■■□□□ 1.47
SFXN1-209ENST00000508290 TTF1Q15361 905 aaPredicted RBP24.25■■□□□ 1.47
SFXN1-209ENST00000508290 CDAN1Q8IWY9 1227 aa24.25■■□□□ 1.47
SFXN1-209ENST00000508290 ZNF384Q8TF68 577 aa24.25■■□□□ 1.47
SFXN1-209ENST00000508290 FZD1Q9UP38 647 aa24.25■■□□□ 1.47
SFXN1-209ENST00000508290 MAST2Q6P0Q8 1798 aa24.24■■□□□ 1.47
SFXN1-209ENST00000508290 MYH2Q9UKX2 1941 aa24.24■■□□□ 1.47
SFXN1-209ENST00000508290 WDHD1O75717 1129 aaPredicted RBP24.24■■□□□ 1.47
SFXN1-209ENST00000508290 RGS3P49796 1198 aa24.24■■□□□ 1.47
SFXN1-209ENST00000508290 RHBDL3P58872 404 aa24.24■■□□□ 1.47
SFXN1-209ENST00000508290 CLMNQ96JQ2 1002 aa24.24■■□□□ 1.47
SFXN1-209ENST00000508290 RNF186Q9NXI6 227 aa24.24■■□□□ 1.47
SFXN1-209ENST00000508290 APBB1O00213 710 aa24.23■■□□□ 1.47
SFXN1-209ENST00000508290 MAP3K12Q12852 859 aa24.23■■□□□ 1.47
SFXN1-209ENST00000508290 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.23■■□□□ 1.47
SFXN1-209ENST00000508290 TNS4Q8IZW8 715 aa24.23■■□□□ 1.47
SFXN1-209ENST00000508290 WRNIP1Q96S55 665 aa24.23■■□□□ 1.47
SFXN1-209ENST00000508290 COL2A1P02458 1487 aaPredicted RBP24.23■■□□□ 1.47
SFXN1-209ENST00000508290 PPP4CP60510 307 aa24.22■■□□□ 1.47
SFXN1-209ENST00000508290 VGLL4Q14135 290 aa24.22■■□□□ 1.47
SFXN1-209ENST00000508290 DCTPP1Q9H773 170 aa24.22■■□□□ 1.47
SFXN1-209ENST00000508290 AKAP11Q9UKA4 1901 aa24.22■■□□□ 1.47
SFXN1-209ENST00000508290 ATRNL1Q5VV63 1379 aa24.21■■□□□ 1.47
SFXN1-209ENST00000508290 TRPA1O75762 1119 aa24.21■■□□□ 1.47
SFXN1-209ENST00000508290 OTUD7BQ6GQQ9 843 aa24.21■■□□□ 1.47
SFXN1-209ENST00000508290 ZSCAN29Q8IWY8 852 aaPredicted RBP24.21■■□□□ 1.47
SFXN1-209ENST00000508290 CFHR5Q9BXR6 569 aa24.21■■□□□ 1.47
SFXN1-209ENST00000508290 SPDYE5A6NIY4 337 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms