RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MNS1Q8NEH6 495 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 ENGASEQ8NFI3 743 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 NKX2-3Q8TAU0 364 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 ANKRD24Q8TF21 1146 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 SUCLG2Q96I99 432 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 HAUS7Q99871 368 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 NOL10Q9BSC4 688 aaKnown RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 AGXT2Q9BYV1 514 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC8Q9H0W5 538 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 POLR3EQ9NVU0 708 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 HOOK1Q9UJC3 728 aaKnown RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 PA2G4Q9UQ80 394 aaKnown RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 FPGT-TNNI3KV9GXZ4 949 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 V9GYY5 206 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 ARHGAP23Q9P227 1491 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 JAK2O60674 1132 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 SLC3A2P08195 630 aaKnown RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 H2AFXP16104 143 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 LTKP29376 864 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 ADD1P35611 737 aaKnown RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 NLRP12P59046 1061 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 PSME1Q06323 249 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 SCRN1Q12765 414 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 GCKRQ14397 625 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 ELF2Q15723 593 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 GRIPAP1Q4V328 841 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 PPP1R18Q6NYC8 613 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 FBXO38Q6PIJ6 1188 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 SYNE3Q6ZMZ3 975 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 C14orf37Q86TY3 774 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZNF589Q86UQ0 364 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 HOMER1Q86YM7 354 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 THEMISQ8N1K5 641 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 TXLNBQ8N3L3 684 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 KBTBD3Q8NAB2 608 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 DDX54Q8TDD1 881 aaKnown RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 UBXN4Q92575 508 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 DDX11Q96FC9 970 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 METTL22Q9BUU2 404 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 LGR6Q9HBX8 967 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 GPR108Q9NPR9 543 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 PALLDQ8WX93 1383 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 PHRF1Q9P1Y6 1649 aaKnown RBP5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 WDR19Q8NEZ3 1342 aa5.74□□□□□ -1.49
HMGB3P16-201ENST00000508037 NEURL1BA8MQ27 555 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 EFCAB8A8MWE9 144 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 SPTLC2O15270 562 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CDKL5O76039 1030 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZFYP08048 801 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CYP21A2P08686 494 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CMA1P23946 247 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 ATP6V1AP38606 617 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 EVCP57679 992 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 ETF1P62495 437 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 EXOSC10Q01780 885 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CEBPZQ03701 1054 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 SLC20A2Q08357 652 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 TUBB2AQ13885 445 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CWF19L2Q2TBE0 894 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 PUS10Q3MIT2 529 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC93Q567U6 631 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC158Q5M9N0 1113 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 NBPF6Q5VWK0 638 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CPLX2Q6PUV4 134 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 OLFM4Q6UX06 510 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 TMC6Q7Z403 805 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 SCUBE3Q8IX30 993 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 FMR1NBQ8N0W7 255 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC34Q96HJ3 373 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 C8orf76Q96K31 380 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 PPP1R13BQ96KQ4 1090 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 NBPF4Q96M43 638 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 TCEANC2Q96MN5 208 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 SLC26A8Q96RN1 970 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 USP28Q96RU2 1077 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 DNAJC2Q99543 621 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 MPHOSPH8Q99549 860 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 TUBB2BQ9BVA1 445 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 GOLPH3LQ9H4A5 285 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 GPCPD1Q9NPB8 672 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 TRMT1Q9NXH9 659 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CWC15Q9P013 229 aaKnown RBP5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 DACH1Q9UI36 760 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 DNAI1Q9UI46 699 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 USP16Q9Y5T5 823 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 SLIT3O75094 1523 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 NFAT5O94916 1531 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 SALL1Q9NSC2 1324 aa5.73□□□□□ -1.49
HMGB3P16-201ENST00000508037 CARMIL3Q8ND23 1372 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 USP27XA6NNY8 438 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 CPLX1O14810 134 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 ARHGAP6O43182 974 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 TUBBP07437 444 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 CD46P15529 392 aa5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 PDIA3P30101 505 aaKnown RBP5.72□□□□□ -1.49
HMGB3P16-201ENST00000508037 FUT2Q10981 343 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms