RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 RRP1P56182 461 aaKnown RBP18.55■□□□□ 0.56
CLDND1-215ENST00000507874 COL13A1Q5TAT6 717 aaPredicted RBP18.55■□□□□ 0.56
CLDND1-215ENST00000507874 FKBP1CQ5VVH2 108 aa18.55■□□□□ 0.56
CLDND1-215ENST00000507874 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
CLDND1-215ENST00000507874 IL1RAPL2Q9NP60 686 aa18.55■□□□□ 0.56
CLDND1-215ENST00000507874 SNRKQ9NRH2 765 aa18.55■□□□□ 0.56
CLDND1-215ENST00000507874 GAKO14976 1311 aa18.54■□□□□ 0.56
CLDND1-215ENST00000507874 APBB1O00213 710 aa18.54■□□□□ 0.56
CLDND1-215ENST00000507874 USP2O75604 605 aaPredicted RBP18.54■□□□□ 0.56
CLDND1-215ENST00000507874 HSPA8P11142 646 aaKnown RBP18.54■□□□□ 0.56
CLDND1-215ENST00000507874 FAM83AQ86UY5 434 aa18.54■□□□□ 0.56
CLDND1-215ENST00000507874 ZNF384Q8TF68 577 aa18.54■□□□□ 0.56
CLDND1-215ENST00000507874 BEGAINQ9BUH8 593 aa18.54■□□□□ 0.56
CLDND1-215ENST00000507874 OTOFQ9HC10 1997 aa18.53■□□□□ 0.56
CLDND1-215ENST00000507874 MECOMQ03112 1051 aa18.53■□□□□ 0.56
CLDND1-215ENST00000507874 AACSQ86V21 672 aa18.53■□□□□ 0.56
CLDND1-215ENST00000507874 FAM163AQ96GL9 167 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-215ENST00000507874 ZNF512BQ96KM6 892 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-215ENST00000507874 USP40Q9NVE5 1235 aa18.53■□□□□ 0.56
CLDND1-215ENST00000507874 LBX1P52954 281 aa18.52■□□□□ 0.55
CLDND1-215ENST00000507874 NFIAQ12857 509 aa18.52■□□□□ 0.55
CLDND1-215ENST00000507874 SLF2Q8IX21 1173 aa18.52■□□□□ 0.55
CLDND1-215ENST00000507874 KIF1BPQ96EK5 621 aa18.52■□□□□ 0.55
CLDND1-215ENST00000507874 CLMNQ96JQ2 1002 aa18.52■□□□□ 0.55
CLDND1-215ENST00000507874 MROH7-TTC4A0A0A0MT08 1334 aa18.51■□□□□ 0.55
CLDND1-215ENST00000507874 MYO5AQ9Y4I1 1855 aaKnown RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 RPAP1Q9BWH6 1393 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 CYP2E1P05181 493 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 ZAP70P43403 619 aa18.51■□□□□ 0.55
CLDND1-215ENST00000507874 IREB2P48200 963 aaKnown RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 MKRN3Q13064 507 aaKnown RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 NSUN4Q96CB9 384 aaKnown RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 CSRNP1Q96S65 589 aa18.51■□□□□ 0.55
CLDND1-215ENST00000507874 RAI14Q9P0K7 980 aa18.51■□□□□ 0.55
CLDND1-215ENST00000507874 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-215ENST00000507874 FAM198AQ9UFP1 575 aa18.51■□□□□ 0.55
CLDND1-215ENST00000507874 TSKSQ9UJT2 592 aa18.51■□□□□ 0.55
CLDND1-215ENST00000507874 MAST2Q6P0Q8 1798 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 RAB11FIP3O75154 756 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 BTDP43251 543 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 TCP10Q12799 353 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 FAM151AQ8WW52 585 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 LRP2BPQ9P2M1 347 aa18.5■□□□□ 0.55
CLDND1-215ENST00000507874 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
CLDND1-215ENST00000507874 SLC10A4Q96EP9 437 aa18.49■□□□□ 0.55
CLDND1-215ENST00000507874 RFX7Q2KHR2 1363 aa18.49■□□□□ 0.55
CLDND1-215ENST00000507874 GPR75-ASB3A0A0A6YYF3 556 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 UNCXA6NJT0 531 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 CA12O43570 354 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 LDHCP07864 332 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 GSTO1P78417 241 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 SPRYD7Q5W111 196 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 ZFPM1Q8IX07 1006 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 PIH1D3Q9NQM4 214 aaKnown RBP18.48■□□□□ 0.55
CLDND1-215ENST00000507874 PCNTO95613 3336 aa18.48■□□□□ 0.55
CLDND1-215ENST00000507874 RGS3P49796 1198 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 RHBDL3P58872 404 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
CLDND1-215ENST00000507874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLDND1-215ENST00000507874 WNK4Q96J92 1243 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 IDI2Q9BXS1 227 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 BCL11AQ9H165 835 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 AK9Q5TCS8 1911 aa18.47■□□□□ 0.55
CLDND1-215ENST00000507874 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
CLDND1-215ENST00000507874 GJA5P36382 358 aa18.46■□□□□ 0.55
CLDND1-215ENST00000507874 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
CLDND1-215ENST00000507874 CRBNQ96SW2 442 aa18.46■□□□□ 0.55
CLDND1-215ENST00000507874 DDX4Q9NQI0 724 aaKnown RBP18.46■□□□□ 0.55
CLDND1-215ENST00000507874 RNF186Q9NXI6 227 aa18.46■□□□□ 0.55
CLDND1-215ENST00000507874 LAMB1P07942 1786 aa18.46■□□□□ 0.55
CLDND1-215ENST00000507874 DOCK2Q92608 1830 aa18.46■□□□□ 0.55
CLDND1-215ENST00000507874 ENTPD3O75355 529 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 TRPA1O75762 1119 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
CLDND1-215ENST00000507874 MAP3K9P80192 1104 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
CLDND1-215ENST00000507874 MIGA2Q7L4E1 593 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 HOOK2Q96ED9 719 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 ELP3Q9H9T3 547 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 PCDHB15Q9Y5E8 787 aa18.45■□□□□ 0.54
CLDND1-215ENST00000507874 ZBTB48P10074 688 aaPredicted RBP18.44■□□□□ 0.54
CLDND1-215ENST00000507874 TM4SF4P48230 202 aa18.44■□□□□ 0.54
CLDND1-215ENST00000507874 PICALMQ13492 652 aa18.44■□□□□ 0.54
CLDND1-215ENST00000507874 VGLL4Q14135 290 aa18.44■□□□□ 0.54
CLDND1-215ENST00000507874 DCAF15Q66K64 600 aa18.44■□□□□ 0.54
CLDND1-215ENST00000507874 SAGE1Q9NXZ1 904 aa18.44■□□□□ 0.54
CLDND1-215ENST00000507874 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
CLDND1-215ENST00000507874 SH3BP5LQ7L8J4 393 aa18.43■□□□□ 0.54
CLDND1-215ENST00000507874 ADGRA1Q86SQ6 560 aa18.43■□□□□ 0.54
CLDND1-215ENST00000507874 WRNIP1Q96S55 665 aa18.43■□□□□ 0.54
CLDND1-215ENST00000507874 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
CLDND1-215ENST00000507874 DCTPP1Q9H773 170 aa18.43■□□□□ 0.54
CLDND1-215ENST00000507874 IDH1O75874 414 aaKnown RBP18.42■□□□□ 0.54
CLDND1-215ENST00000507874 SREBF2Q12772 1141 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
CLDND1-215ENST00000507874 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms