RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 FANCLQ9NW38 375 aa20.39■□□□□ 0.85
NUP54-205ENST00000507257 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 A0A087WZG4 1122 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 TMEM232C9JQI7 657 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 M0R2C6 588 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 USP5P45974 858 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 CCDC102BQ68D86 513 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 SPECC1LQ69YQ0 1117 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 NCOA7Q8NI08 942 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 HOOK1Q9UJC3 728 aaKnown RBP20.38■□□□□ 0.85
NUP54-205ENST00000507257 ABCC12Q96J65 1359 aa20.38■□□□□ 0.85
NUP54-205ENST00000507257 KDM6AO15550 1401 aaPredicted RBP20.37■□□□□ 0.85
NUP54-205ENST00000507257 CIAO1O76071 339 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 IFIT1P09914 478 aaKnown RBP20.37■□□□□ 0.85
NUP54-205ENST00000507257 FOXO4P98177 505 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 LONRF2Q1L5Z9 754 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 METTL16Q86W50 562 aaKnown RBP20.37■□□□□ 0.85
NUP54-205ENST00000507257 MAP3K14Q99558 947 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 DACH1Q9UI36 760 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 H7C1W4 665 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 CDKL5O76039 1030 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
NUP54-205ENST00000507257 NT5DC1Q5TFE4 455 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 TTLL5Q6EMB2 1281 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 ENOX1Q8TC92 643 aaKnown RBP20.37■□□□□ 0.85
NUP54-205ENST00000507257 RAB21Q9UL25 225 aa20.37■□□□□ 0.85
NUP54-205ENST00000507257 ZMYM6O95789 1325 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 FOXP2O15409 715 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 RPS6KA5O75582 802 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 ANTXR2P58335 489 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 PNOCQ13519 176 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 TRIML1Q8N9V2 468 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 NFATC2IPQ8NCF5 419 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 PLBD2Q8NHP8 589 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 OSBP2Q969R2 916 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
NUP54-205ENST00000507257 ADAM21Q9UKJ8 722 aa20.36■□□□□ 0.85
NUP54-205ENST00000507257 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 CT47A1Q5JQC4 288 aaPredicted RBP20.35■□□□□ 0.85
NUP54-205ENST00000507257 SRGAP1Q7Z6B7 1085 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 VPS37DQ86XT2 251 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 MLKLQ8NB16 471 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 MSANTD4Q8NCY6 345 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 NEUROD6Q96NK8 337 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 GCP02774 474 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 MARCKSP29966 332 aaPredicted RBP20.35■□□□□ 0.85
NUP54-205ENST00000507257 MDM2Q00987 491 aaPredicted RBP20.35■□□□□ 0.85
NUP54-205ENST00000507257 CEP112Q8N8E3 955 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 PANX2Q96RD6 677 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 NAA15Q9BXJ9 866 aaKnown RBP20.35■□□□□ 0.85
NUP54-205ENST00000507257 RASSF4Q9H2L5 321 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 ZCCHC17Q9NP64 241 aaKnown RBP20.35■□□□□ 0.85
NUP54-205ENST00000507257 PCDHA5Q9Y5H7 936 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 ECM29Q5VYK3 1845 aa20.35■□□□□ 0.85
NUP54-205ENST00000507257 MYH7P12883 1935 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 TJP1Q07157 1748 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 EYA2O00167 538 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 TUBBP07437 444 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 ACTN2P35609 894 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 GNL2Q13823 731 aaKnown RBP20.34■□□□□ 0.85
NUP54-205ENST00000507257 ISM2Q6H9L7 571 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 FOXP4Q8IVH2 680 aaPredicted RBP20.34■□□□□ 0.85
NUP54-205ENST00000507257 CNNM3Q8NE01 707 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 DHX58Q96C10 678 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 EFCC1Q9HA90 598 aa20.34■□□□□ 0.85
NUP54-205ENST00000507257 FGAP02671 866 aa20.33■□□□□ 0.85
NUP54-205ENST00000507257 IVLP07476 585 aa20.33■□□□□ 0.85
NUP54-205ENST00000507257 CCDC175P0C221 793 aa20.33■□□□□ 0.85
NUP54-205ENST00000507257 TOGARAM2Q6ZUX3 1019 aa20.33■□□□□ 0.85
NUP54-205ENST00000507257 RALYLQ86SE5 291 aaKnown RBP20.33■□□□□ 0.85
NUP54-205ENST00000507257 ALG1Q9BT22 464 aa20.33■□□□□ 0.85
NUP54-205ENST00000507257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.856e-8■■■□□ 16.7
NUP54-205ENST00000507257 KCNH3Q9ULD8 1083 aa20.33■□□□□ 0.85
NUP54-205ENST00000507257 KIF13AQ9H1H9 1805 aa20.33■□□□□ 0.84
NUP54-205ENST00000507257 BMP6P22004 513 aa20.33■□□□□ 0.84
NUP54-205ENST00000507257 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.84
NUP54-205ENST00000507257 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.84
NUP54-205ENST00000507257 EPC1Q9H2F5 836 aa20.33■□□□□ 0.84
NUP54-205ENST00000507257 SARSP49591 514 aaKnown RBP20.32■□□□□ 0.84
NUP54-205ENST00000507257 CHMP4BP1P59074 171 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 TIMM10P62072 90 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 SLC39A6Q13433 755 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 LONRF3Q496Y0 759 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 BEND6Q5SZJ8 279 aaPredicted RBP20.32■□□□□ 0.84
NUP54-205ENST00000507257 KRT40Q6A162 431 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 HDXQ7Z353 690 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
NUP54-205ENST00000507257 CCDC191Q8NCU4 936 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 CCDC34Q96HJ3 373 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 TRIM34Q9BYJ4 488 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 CDC23Q9UJX2 597 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 FBXO3Q9UK99 471 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
NUP54-205ENST00000507257 MYO1CO00159 1063 aa20.31■□□□□ 0.84
NUP54-205ENST00000507257 ERLIN1O75477 346 aa20.31■□□□□ 0.84
NUP54-205ENST00000507257 PDE4BQ07343 736 aa20.31■□□□□ 0.84
NUP54-205ENST00000507257 GOLGA8FQ08AF8 430 aa20.31■□□□□ 0.84
NUP54-205ENST00000507257 GOLGA8DPQ0D2H9 430 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms