RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CAPNS2Q96L46 248 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 NOL10Q9BSC4 688 aaKnown RBP20.35■□□□□ 0.85
SNCA-209ENST00000506244 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
SNCA-209ENST00000506244 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
SNCA-209ENST00000506244 PPP1R12BO60237 982 aaPredicted RBP20.34■□□□□ 0.85
SNCA-209ENST00000506244 CYP2E1P05181 493 aaPredicted RBP20.34■□□□□ 0.85
SNCA-209ENST00000506244 HDAC1Q13547 482 aaPredicted RBP20.34■□□□□ 0.85
SNCA-209ENST00000506244 TTF1Q15361 905 aaPredicted RBP20.34■□□□□ 0.85
SNCA-209ENST00000506244 ZBTB47Q9UFB7 747 aaPredicted RBP20.34■□□□□ 0.85
SNCA-209ENST00000506244 MAP4K4O95819 1239 aaPredicted RBP20.33■□□□□ 0.85
SNCA-209ENST00000506244 BTDP43251 543 aa20.33■□□□□ 0.85
SNCA-209ENST00000506244 NAA16Q6N069 864 aaPredicted RBP20.33■□□□□ 0.85
SNCA-209ENST00000506244 CYP4F22Q6NT55 531 aa20.33■□□□□ 0.85
SNCA-209ENST00000506244 RGMBQ6NW40 437 aa20.33■□□□□ 0.85
SNCA-209ENST00000506244 CDC42EP5Q6NZY7 148 aa20.33■□□□□ 0.85
SNCA-209ENST00000506244 SSC5DA1L4H1 1573 aa20.33■□□□□ 0.84
SNCA-209ENST00000506244 CACNB3P54284 484 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 GRM1Q13255 1194 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 CCDC102AQ96A19 550 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 GCC1Q96CN9 775 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 TMEM39BQ9GZU3 492 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 USP40Q9NVE5 1235 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 DOCK2Q92608 1830 aa20.32■□□□□ 0.84
SNCA-209ENST00000506244 GPR75-ASB3A0A0A6YYF3 556 aa20.31■□□□□ 0.84
SNCA-209ENST00000506244 SMARCA5O60264 1052 aaPredicted RBP20.31■□□□□ 0.84
SNCA-209ENST00000506244 IDH1O75874 414 aaKnown RBP20.31■□□□□ 0.84
SNCA-209ENST00000506244 ZNF157P51786 506 aaPredicted RBP20.31■□□□□ 0.84
SNCA-209ENST00000506244 MAP3K12Q12852 859 aa20.31■□□□□ 0.84
SNCA-209ENST00000506244 NOGQ13253 232 aa20.31■□□□□ 0.84
SNCA-209ENST00000506244 NBPF12Q5TAG4 269 aaPredicted RBP20.31■□□□□ 0.84
SNCA-209ENST00000506244 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
SNCA-209ENST00000506244 UNCXA6NJT0 531 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 BAG3O95817 575 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 PLCG2P16885 1265 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 ATP5JP18859 108 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 IREB2P48200 963 aaKnown RBP20.3■□□□□ 0.84
SNCA-209ENST00000506244 CERS3Q8IU89 383 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 FAM151AQ8WW52 585 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 PIH1D3Q9NQM4 214 aaKnown RBP20.3■□□□□ 0.84
SNCA-209ENST00000506244 ANGEL1Q9UNK9 670 aaKnown RBP20.3■□□□□ 0.84
SNCA-209ENST00000506244 RFX7Q2KHR2 1363 aa20.3■□□□□ 0.84
SNCA-209ENST00000506244 MAP2K2P36507 400 aa20.29■□□□□ 0.84
SNCA-209ENST00000506244 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
SNCA-209ENST00000506244 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
SNCA-209ENST00000506244 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
SNCA-209ENST00000506244 DNAJC2Q99543 621 aaKnown RBP20.29■□□□□ 0.84
SNCA-209ENST00000506244 IDI2Q9BXS1 227 aa20.29■□□□□ 0.84
SNCA-209ENST00000506244 RWDD1Q9H446 243 aaPredicted RBP20.29■□□□□ 0.84
SNCA-209ENST00000506244 ENTPD3O75355 529 aa20.28■□□□□ 0.84
SNCA-209ENST00000506244 SLC10A3P09131 477 aa20.28■□□□□ 0.84
SNCA-209ENST00000506244 MAP2K1Q02750 393 aaPredicted RBP20.28■□□□□ 0.84
SNCA-209ENST00000506244 PRKG1Q13976 671 aa20.28■□□□□ 0.84
SNCA-209ENST00000506244 DCAF15Q66K64 600 aa20.28■□□□□ 0.84
SNCA-209ENST00000506244 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
SNCA-209ENST00000506244 UBE2Q2LH0YL09 131 aa20.27■□□□□ 0.84
SNCA-209ENST00000506244 GOLIM4O00461 696 aa20.27■□□□□ 0.84
SNCA-209ENST00000506244 NFIAQ12857 509 aa20.27■□□□□ 0.84
SNCA-209ENST00000506244 MOB2Q70IA6 237 aa20.27■□□□□ 0.84
SNCA-209ENST00000506244 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.84
SNCA-209ENST00000506244 MYO5AQ9Y4I1 1855 aaKnown RBP20.26■□□□□ 0.83
SNCA-209ENST00000506244 COL2A1P02458 1487 aaPredicted RBP20.26■□□□□ 0.83
SNCA-209ENST00000506244 NPM3O75607 178 aaKnown RBP20.26■□□□□ 0.83
SNCA-209ENST00000506244 CYP7A1P22680 504 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 RGS3P49796 1198 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 TCP10Q12799 353 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 LDLRAD1Q5T700 205 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 RASAL3Q86YV0 1011 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 AIDAQ96BJ3 306 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 HAUS7Q99871 368 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 ANTXR1Q9H6X2 564 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 PAG1Q9NWQ8 432 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 FAM198AQ9UFP1 575 aa20.26■□□□□ 0.83
SNCA-209ENST00000506244 ERC2O15083 957 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 WDHD1O75717 1129 aaPredicted RBP20.25■□□□□ 0.83
SNCA-209ENST00000506244 RHBDL3P58872 404 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 TEX11Q8IYF3 940 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 ANKRD13AQ8IZ07 590 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 MAGEB6Q8N7X4 407 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 BEGAINQ9BUH8 593 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNCA-209ENST00000506244 TTC41PQ6P2S7 1318 aa20.25■□□□□ 0.83
SNCA-209ENST00000506244 FAM155AB1AL88 458 aaPredicted RBP20.24■□□□□ 0.83
SNCA-209ENST00000506244 PPP4CP60510 307 aa20.24■□□□□ 0.83
SNCA-209ENST00000506244 PICALMQ13492 652 aa20.24■□□□□ 0.83
SNCA-209ENST00000506244 CDAN1Q8IWY9 1227 aa20.24■□□□□ 0.83
SNCA-209ENST00000506244 REM2Q8IYK8 340 aaPredicted RBP20.24■□□□□ 0.83
SNCA-209ENST00000506244 AATFQ9NY61 560 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNCA-209ENST00000506244 OTOFQ9HC10 1997 aa20.24■□□□□ 0.83
SNCA-209ENST00000506244 AOC2O75106 756 aa20.23■□□□□ 0.83
SNCA-209ENST00000506244 USP2O75604 605 aaPredicted RBP20.23■□□□□ 0.83
SNCA-209ENST00000506244 HSPA1AP0DMV8 641 aaKnown RBP20.23■□□□□ 0.83
SNCA-209ENST00000506244 HSPA1BP0DMV9 641 aaKnown RBP20.23■□□□□ 0.83
SNCA-209ENST00000506244 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
SNCA-209ENST00000506244 ZSCAN29Q8IWY8 852 aaPredicted RBP20.23■□□□□ 0.83
SNCA-209ENST00000506244 CSRNP1Q96S65 589 aa20.23■□□□□ 0.83
SNCA-209ENST00000506244 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
SNCA-209ENST00000506244 SLC9C2Q5TAH2 1124 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 ZSCAN25Q6NSZ9 544 aa20.22■□□□□ 0.83
SNCA-209ENST00000506244 ADGRA1Q86SQ6 560 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms