RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 MRIQ9BWK5 157 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 MKI67P46013 3256 aaKnown RBP13.24□□□□□ -0.29
CPNE4-206ENST00000505957 TLR2O60603 784 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 CETPP11597 493 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 RPAP2Q8IXW5 612 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-206ENST00000505957 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 HOOK2Q96ED9 719 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 C9orf78Q9NZ63 289 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-206ENST00000505957 RIPOR2Q9Y4F9 1068 aa13.24□□□□□ -0.29
CPNE4-206ENST00000505957 MROH5Q6ZUA9 1318 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 GNAI3P08754 354 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 PRMT2P55345 433 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 KIF22Q14807 665 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 SLC4A8Q2Y0W8 1093 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 FKBP1CQ5VVH2 108 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 ERO1BQ86YB8 467 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
CPNE4-206ENST00000505957 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-206ENST00000505957 SNAPC2Q13487 334 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
CPNE4-206ENST00000505957 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-206ENST00000505957 SUGT1Q9Y2Z0 365 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 SNCAIPQ9Y6H5 919 aa13.22□□□□□ -0.29
CPNE4-206ENST00000505957 BTBD19C9JJ37 291 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 IRF6O14896 467 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 PPIL2Q13356 520 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 GRIK5Q16478 980 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 MEIS3Q99687 375 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 TMOD2Q9NZR1 351 aa13.21□□□□□ -0.29
CPNE4-206ENST00000505957 UTYO14607 1347 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 ARAP2Q8WZ64 1704 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 PPATQ06203 517 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 DCAF15Q66K64 600 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 APOBEC3HQ6NTF7 200 aaKnown RBP13.2□□□□□ -0.3
CPNE4-206ENST00000505957 CEP85Q6P2H3 762 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 SUCLG2Q96I99 432 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
CPNE4-206ENST00000505957 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
CPNE4-206ENST00000505957 CENPFP49454 3210 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 MAST3O60307 1309 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 GNAI2P04899 355 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 NUCB1Q02818 461 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-206ENST00000505957 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-206ENST00000505957 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 SH3TC2Q8TF17 1288 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-206ENST00000505957 RBM19Q9Y4C8 960 aaKnown RBP13.19□□□□□ -0.3
CPNE4-206ENST00000505957 BRCA2P51587 3418 aa13.19□□□□□ -0.3
CPNE4-206ENST00000505957 H0YGN5 161 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 HMMRO75330 724 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
CPNE4-206ENST00000505957 PDE8BO95263 885 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
CPNE4-206ENST00000505957 HOXD10P28358 340 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 CACNB3P54284 484 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 METTL24Q5JXM2 366 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 ANKRD23Q86SG2 305 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
CPNE4-206ENST00000505957 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
CPNE4-206ENST00000505957 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
CPNE4-206ENST00000505957 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
CPNE4-206ENST00000505957 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
CPNE4-206ENST00000505957 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
CPNE4-206ENST00000505957 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
CPNE4-206ENST00000505957 KCNH4Q9UQ05 1017 aa13.17□□□□□ -0.3
CPNE4-206ENST00000505957 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
CPNE4-206ENST00000505957 MYCP01106 439 aaPredicted RBP13.16□□□□□ -0.3
CPNE4-206ENST00000505957 PDE4AP27815 886 aa13.16□□□□□ -0.3
CPNE4-206ENST00000505957 PSMC4P43686 418 aa13.16□□□□□ -0.3
CPNE4-206ENST00000505957 BCAMP50895 628 aa13.16□□□□□ -0.3
CPNE4-206ENST00000505957 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
CPNE4-206ENST00000505957 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
CPNE4-206ENST00000505957 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
CPNE4-206ENST00000505957 ADGRA2Q96PE1 1338 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 CEP290O15078 2479 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 PDHXO00330 501 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
CPNE4-206ENST00000505957 FGFR2P21802 821 aa13.15□□□□□ -0.3
CPNE4-206ENST00000505957 CTGFP29279 349 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms