RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 F8W031 263 aaPredicted RBP20.67■□□□□ 0.9
SYNE4-207ENST00000505054 ZBTB48P10074 688 aaPredicted RBP20.67■□□□□ 0.9
SYNE4-207ENST00000505054 HDAC1Q13547 482 aaPredicted RBP20.67■□□□□ 0.9
SYNE4-207ENST00000505054 TBC1D22AQ8WUA7 517 aa20.67■□□□□ 0.9
SYNE4-207ENST00000505054 FZD1Q9UP38 647 aa20.67■□□□□ 0.9
SYNE4-207ENST00000505054 MYO1BO43795 1136 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 PPP1R12BO60237 982 aaPredicted RBP20.66■□□□□ 0.9
SYNE4-207ENST00000505054 INHBEP58166 350 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 PI16Q6UXB8 463 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 CLASRPQ8N2M8 674 aaKnown RBP20.66■□□□□ 0.9
SYNE4-207ENST00000505054 WDR66Q8TBY9 1149 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 R3HDMLQ9H3Y0 253 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 PDS5AQ29RF7 1337 aaKnown RBP20.66■□□□□ 0.9
SYNE4-207ENST00000505054 HTTP42858 3142 aa20.66■□□□□ 0.9
SYNE4-207ENST00000505054 MYH13Q9UKX3 1938 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 SALL1Q9NSC2 1324 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 SPDYE2BA6NHP3 402 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 UNCXA6NJT0 531 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 SMARCA5O60264 1052 aaPredicted RBP20.65■□□□□ 0.9
SYNE4-207ENST00000505054 SPDYE6P0CI01 402 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 MCAMP43121 646 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 IFNL1Q8IU54 200 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 SLC10A4Q96EP9 437 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 WNK4Q96J92 1243 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 HMG20BQ9P0W2 317 aa20.65■□□□□ 0.9
SYNE4-207ENST00000505054 UQCRFS1P1P0C7P4 283 aa20.64■□□□□ 0.89
SYNE4-207ENST00000505054 CFAP100Q494V2 611 aa20.64■□□□□ 0.89
SYNE4-207ENST00000505054 CCDC158Q5M9N0 1113 aa20.64■□□□□ 0.89
SYNE4-207ENST00000505054 TTC39AQ5SRH9 613 aa20.64■□□□□ 0.89
SYNE4-207ENST00000505054 TTF2Q9UNY4 1162 aaKnown RBP20.64■□□□□ 0.89
SYNE4-207ENST00000505054 SUPT20HL1Q3ZLR7 823 aa20.63■□□□□ 0.89
SYNE4-207ENST00000505054 SPATA5Q8NB90 893 aa20.63■□□□□ 0.89
SYNE4-207ENST00000505054 CLMNQ96JQ2 1002 aa20.63■□□□□ 0.89
SYNE4-207ENST00000505054 ZNF512BQ96KM6 892 aaPredicted RBP20.63■□□□□ 0.89
SYNE4-207ENST00000505054 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
SYNE4-207ENST00000505054 PCDHAC2Q9Y5I4 1007 aa20.63■□□□□ 0.89
SYNE4-207ENST00000505054 CLRN2A0PK11 232 aa20.62■□□□□ 0.89
SYNE4-207ENST00000505054 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
SYNE4-207ENST00000505054 PRDX5P30044 214 aa20.62■□□□□ 0.89
SYNE4-207ENST00000505054 IREB2P48200 963 aaKnown RBP20.62■□□□□ 0.89
SYNE4-207ENST00000505054 VEZTQ9HBM0 779 aa20.62■□□□□ 0.89
SYNE4-207ENST00000505054 SUGT1Q9Y2Z0 365 aa20.62■□□□□ 0.89
SYNE4-207ENST00000505054 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
SYNE4-207ENST00000505054 IGHDP01880 384 aa20.61■□□□□ 0.89
SYNE4-207ENST00000505054 SNRKQ9NRH2 765 aa20.61■□□□□ 0.89
SYNE4-207ENST00000505054 TRIM17Q9Y577 477 aa20.61■□□□□ 0.89
SYNE4-207ENST00000505054 AOX1Q06278 1338 aa20.6■□□□□ 0.89
SYNE4-207ENST00000505054 PRMT6Q96LA8 375 aaPredicted RBP20.6■□□□□ 0.89
SYNE4-207ENST00000505054 RWDD1Q9H446 243 aaPredicted RBP20.6■□□□□ 0.89
SYNE4-207ENST00000505054 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.6■□□□□ 0.89
SYNE4-207ENST00000505054 SERPINA10Q9UK55 444 aa20.6■□□□□ 0.89
SYNE4-207ENST00000505054 CENPBP07199 599 aaPredicted RBP20.59■□□□□ 0.89
SYNE4-207ENST00000505054 CRKP46108 304 aa20.59■□□□□ 0.89
SYNE4-207ENST00000505054 TNFAIP1Q13829 316 aa20.59■□□□□ 0.89
SYNE4-207ENST00000505054 NBPF12Q5TAG4 269 aaPredicted RBP20.59■□□□□ 0.89
SYNE4-207ENST00000505054 OTOP1Q7RTM1 612 aa20.59■□□□□ 0.89
SYNE4-207ENST00000505054 ANKRD13AQ8IZ07 590 aa20.59■□□□□ 0.89
SYNE4-207ENST00000505054 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
SYNE4-207ENST00000505054 ERO1AQ96HE7 468 aa20.59■□□□□ 0.89
SYNE4-207ENST00000505054 MAST3O60307 1309 aa20.58■□□□□ 0.89
SYNE4-207ENST00000505054 LDHBP07195 334 aaKnown RBP20.58■□□□□ 0.89
SYNE4-207ENST00000505054 ZAP70P43403 619 aa20.58■□□□□ 0.89
SYNE4-207ENST00000505054 RBM5P52756 815 aaKnown RBP eCLIP20.58■□□□□ 0.89
SYNE4-207ENST00000505054 HDLBPQ00341 1268 aaKnown RBP20.58■□□□□ 0.89
SYNE4-207ENST00000505054 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
SYNE4-207ENST00000505054 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.89
SYNE4-207ENST00000505054 ZGPATQ8N5A5 531 aaKnown RBP20.58■□□□□ 0.89
SYNE4-207ENST00000505054 ABCF2Q9UG63 623 aa20.58■□□□□ 0.89
SYNE4-207ENST00000505054 USP2O75604 605 aaPredicted RBP20.57■□□□□ 0.88
SYNE4-207ENST00000505054 CYP2E1P05181 493 aaPredicted RBP20.57■□□□□ 0.88
SYNE4-207ENST00000505054 GJA5P36382 358 aa20.57■□□□□ 0.88
SYNE4-207ENST00000505054 RASA3Q14644 834 aa20.57■□□□□ 0.88
SYNE4-207ENST00000505054 DIXDC1Q155Q3 683 aa20.57■□□□□ 0.88
SYNE4-207ENST00000505054 SPDYE2Q495Y8 402 aa20.57■□□□□ 0.88
SYNE4-207ENST00000505054 SMC5Q8IY18 1101 aa20.57■□□□□ 0.88
SYNE4-207ENST00000505054 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
SYNE4-207ENST00000505054 CRHR2Q13324 411 aa20.56■□□□□ 0.88
SYNE4-207ENST00000505054 TEKT1Q969V4 418 aa20.56■□□□□ 0.88
SYNE4-207ENST00000505054 MRIQ9BWK5 157 aa20.56■□□□□ 0.88
SYNE4-207ENST00000505054 CENPFP49454 3210 aa20.55■□□□□ 0.88
SYNE4-207ENST00000505054 TESPA1A2RU30 521 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-207ENST00000505054 ANKRD45Q5TZF3 282 aa20.55■□□□□ 0.88
SYNE4-207ENST00000505054 SPTY2D1Q68D10 685 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-207ENST00000505054 HHIPL2Q6UWX4 724 aa20.55■□□□□ 0.88
SYNE4-207ENST00000505054 OTUD7AQ8TE49 926 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-207ENST00000505054 ZNF384Q8TF68 577 aa20.55■□□□□ 0.88
SYNE4-207ENST00000505054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.55■□□□□ 0.88
SYNE4-207ENST00000505054 PIH1D3Q9NQM4 214 aaKnown RBP20.55■□□□□ 0.88
SYNE4-207ENST00000505054 ZNF70Q9UC06 446 aaPredicted RBP20.55■□□□□ 0.88
SYNE4-207ENST00000505054 MKI67P46013 3256 aaKnown RBP20.54■□□□□ 0.88
SYNE4-207ENST00000505054 ATP5JP18859 108 aa20.54■□□□□ 0.88
SYNE4-207ENST00000505054 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
SYNE4-207ENST00000505054 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
SYNE4-207ENST00000505054 ZDHHC15Q96MV8 337 aa20.54■□□□□ 0.88
SYNE4-207ENST00000505054 PTPN22Q9Y2R2 807 aa20.54■□□□□ 0.88
SYNE4-207ENST00000505054 DAGLAQ9Y4D2 1042 aa20.54■□□□□ 0.88
SYNE4-207ENST00000505054 MECOMQ03112 1051 aa20.53■□□□□ 0.88
SYNE4-207ENST00000505054 APOBEC3HQ6NTF7 200 aaKnown RBP20.53■□□□□ 0.88
SYNE4-207ENST00000505054 DZIP1Q86YF9 867 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms