RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 TMC1Q8TDI8 760 aa8.46□□□□□ -1.06
SSBP2-204ENST00000504985 SCG3Q8WXD2 468 aaKnown RBP8.46□□□□□ -1.06
SSBP2-204ENST00000504985 BCS1LQ9Y276 419 aa8.46□□□□□ -1.06
SSBP2-204ENST00000504985 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
SSBP2-204ENST00000504985 CPSF1Q10570 1443 aaKnown RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 PPIP5K1Q6PFW1 1433 aa8.45□□□□□ -1.06
SSBP2-204ENST00000504985 BRD4O60885 1362 aaPredicted RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 HSPA1LP34931 641 aa8.45□□□□□ -1.06
SSBP2-204ENST00000504985 FAM193AP78312 1265 aa8.45□□□□□ -1.06
SSBP2-204ENST00000504985 SLC20A2Q08357 652 aa8.45□□□□□ -1.06
SSBP2-204ENST00000504985 PROSER2Q86WR7 435 aaPredicted RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 ZNF830Q96NB3 372 aaPredicted RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 DNAJC2Q99543 621 aaKnown RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
SSBP2-204ENST00000504985 ISY1Q9ULR0 285 aaKnown RBP8.45□□□□□ -1.06
SSBP2-204ENST00000504985 ZNF335Q9H4Z2 1342 aaPredicted RBP8.44□□□□□ -1.06
SSBP2-204ENST00000504985 RGPD8O14715 1765 aaPredicted RBP8.44□□□□□ -1.06
SSBP2-204ENST00000504985 SEMA6BQ9H3T3 888 aa8.44□□□□□ -1.06
SSBP2-204ENST00000504985 MRS2Q9HD23 443 aa8.44□□□□□ -1.06
SSBP2-204ENST00000504985 TPSG1Q9NRR2 321 aa8.44□□□□□ -1.06
SSBP2-204ENST00000504985 ADGRL3Q9HAR2 1447 aa8.44□□□□□ -1.06
SSBP2-204ENST00000504985 ANKARQ7Z5J8 1434 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 TGFBR3LH3BV60 316 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 IGFBP4P22692 258 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
SSBP2-204ENST00000504985 RTN1Q16799 776 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
SSBP2-204ENST00000504985 B4GALNT3Q6L9W6 998 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 CNPY4Q8N129 248 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
SSBP2-204ENST00000504985 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 HDAC5Q9UQL6 1122 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 NSD2O96028 1365 aa8.43□□□□□ -1.06
SSBP2-204ENST00000504985 EDC4Q6P2E9 1401 aaKnown RBP8.42□□□□□ -1.06
SSBP2-204ENST00000504985 A6NJR5 290 aa8.42□□□□□ -1.06
SSBP2-204ENST00000504985 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
SSBP2-204ENST00000504985 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
SSBP2-204ENST00000504985 BHMTQ93088 406 aa8.42□□□□□ -1.06
SSBP2-204ENST00000504985 PLCD4Q9BRC7 762 aa8.42□□□□□ -1.06
SSBP2-204ENST00000504985 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
SSBP2-204ENST00000504985 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
SSBP2-204ENST00000504985 CGNL1Q0VF96 1302 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 SHPRHQ149N8 1683 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 LILRB5O75023 590 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 PPP2R1AP30153 589 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 PIP4K2BP78356 416 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 DPYDQ12882 1025 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 GRIK4Q16099 956 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.41□□□□□ -1.06
SSBP2-204ENST00000504985 CEP120Q8N960 986 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 NACC1Q96RE7 527 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 YY1AP1Q9H869 796 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 C11orf16Q9NQ32 467 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 SLC6A14Q9UN76 642 aa8.41□□□□□ -1.06
SSBP2-204ENST00000504985 XIRP1Q702N8 1843 aaKnown RBP8.41□□□□□ -1.06
SSBP2-204ENST00000504985 APBA3O96018 575 aa8.4□□□□□ -1.06
SSBP2-204ENST00000504985 SELPP16109 830 aa8.4□□□□□ -1.06
SSBP2-204ENST00000504985 SETQ01105 290 aaPredicted RBP8.4□□□□□ -1.06
SSBP2-204ENST00000504985 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
SSBP2-204ENST00000504985 PNISRQ8TF01 805 aaKnown RBP8.4□□□□□ -1.06
SSBP2-204ENST00000504985 POLR3AO14802 1390 aaPredicted RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 INPP5BP32019 993 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 FOXD4L6Q3SYB3 417 aaPredicted RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 FOXD4L3Q6VB84 417 aaPredicted RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 HDGFL2Q7Z4V5 671 aaPredicted RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 ZHX1Q9UKY1 873 aaPredicted RBP8.39□□□□□ -1.07
SSBP2-204ENST00000504985 USP6P35125 1406 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 SSH2Q76I76 1423 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 PIK3C2AO00443 1686 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 USP54Q70EL1 1684 aa8.39□□□□□ -1.07
SSBP2-204ENST00000504985 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 C9orf172C9J069 976 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 DYRK3O43781 588 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 WEE1P30291 646 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 AFF1P51825 1210 aaKnown RBP8.38□□□□□ -1.07
SSBP2-204ENST00000504985 IRX6P78412 446 aaPredicted RBP8.38□□□□□ -1.07
SSBP2-204ENST00000504985 CCINQ13939 588 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 FAM9BQ8IZU0 186 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 DNAJB12Q9NXW2 375 aaKnown RBP8.38□□□□□ -1.07
SSBP2-204ENST00000504985 NAGPAQ9UK23 515 aa8.38□□□□□ -1.07
SSBP2-204ENST00000504985 MARF1Q9Y4F3 1742 aaKnown RBP8.38□□□□□ -1.07
SSBP2-204ENST00000504985 BLMP54132 1417 aaPredicted RBP8.38□□□□□ -1.07
SSBP2-204ENST00000504985 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L21D6R901 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
SSBP2-204ENST00000504985 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms