RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SLF2Q8IX21 1173 aa24.66■■□□□ 1.54
HERC6-205ENST00000504905 TDRD3Q9H7E2 651 aaKnown RBP24.66■■□□□ 1.54
HERC6-205ENST00000504905 GBA2Q9HCG7 927 aaPredicted RBP24.66■■□□□ 1.54
HERC6-205ENST00000504905 ZAP70P43403 619 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 C2orf69Q8N8R5 385 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 CCDC102AQ96A19 550 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 CDCA5Q96FF9 252 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 RWDD1Q9H446 243 aaPredicted RBP24.65■■□□□ 1.54
HERC6-205ENST00000504905 SAGE1Q9NXZ1 904 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 RAI14Q9P0K7 980 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 LRP2BPQ9P2M1 347 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 ZNF70Q9UC06 446 aaPredicted RBP24.65■■□□□ 1.54
HERC6-205ENST00000504905 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
HERC6-205ENST00000504905 MYO5AQ9Y4I1 1855 aaKnown RBP24.64■■□□□ 1.54
HERC6-205ENST00000504905 TNRC18O15417 2968 aaPredicted RBP24.64■■□□□ 1.54
HERC6-205ENST00000504905 CYP2E1P05181 493 aaPredicted RBP24.64■■□□□ 1.54
HERC6-205ENST00000504905 APOBEC3HQ6NTF7 200 aaKnown RBP24.64■■□□□ 1.54
HERC6-205ENST00000504905 GCC1Q96CN9 775 aa24.64■■□□□ 1.54
HERC6-205ENST00000504905 MAST2Q6P0Q8 1798 aa24.63■■□□□ 1.53
HERC6-205ENST00000504905 MECOMQ03112 1051 aa24.63■■□□□ 1.53
HERC6-205ENST00000504905 ZBTB47Q9UFB7 747 aaPredicted RBP24.63■■□□□ 1.53
HERC6-205ENST00000504905 GSTO1P78417 241 aa24.62■■□□□ 1.53
HERC6-205ENST00000504905 TNFAIP1Q13829 316 aa24.62■■□□□ 1.53
HERC6-205ENST00000504905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.62■■□□□ 1.53
HERC6-205ENST00000504905 DEFB129Q9H1M3 183 aa24.62■■□□□ 1.53
HERC6-205ENST00000504905 TMOD2Q9NZR1 351 aa24.62■■□□□ 1.53
HERC6-205ENST00000504905 KIF23Q02241 960 aaPredicted RBP24.61■■□□□ 1.53
HERC6-205ENST00000504905 PRAMEF18Q5VWM3 479 aa24.61■■□□□ 1.53
HERC6-205ENST00000504905 PPP2R3BQ9Y5P8 575 aa24.61■■□□□ 1.53
HERC6-205ENST00000504905 NDUFB9Q9Y6M9 179 aa24.61■■□□□ 1.53
HERC6-205ENST00000504905 GAKO14976 1311 aa24.61■■□□□ 1.53
HERC6-205ENST00000504905 LDHCP07864 332 aa24.6■■□□□ 1.53
HERC6-205ENST00000504905 ZNF157P51786 506 aaPredicted RBP24.6■■□□□ 1.53
HERC6-205ENST00000504905 NSUN4Q96CB9 384 aaKnown RBP24.6■■□□□ 1.53
HERC6-205ENST00000504905 GPATCH3Q96I76 525 aa24.6■■□□□ 1.53
HERC6-205ENST00000504905 PIH1D3Q9NQM4 214 aaKnown RBP24.6■■□□□ 1.53
HERC6-205ENST00000504905 MROH7-TTC4A0A0A0MT08 1334 aa24.6■■□□□ 1.53
HERC6-205ENST00000504905 DOCK2Q92608 1830 aa24.59■■□□□ 1.53
HERC6-205ENST00000504905 TCP10L2B9ZVM9 353 aa24.59■■□□□ 1.53
HERC6-205ENST00000504905 ATP5JP18859 108 aa24.59■■□□□ 1.53
HERC6-205ENST00000504905 NF2P35240 595 aa24.59■■□□□ 1.53
HERC6-205ENST00000504905 TNNI2P48788 182 aa24.59■■□□□ 1.53
HERC6-205ENST00000504905 ANKRD45Q5TZF3 282 aa24.59■■□□□ 1.53
HERC6-205ENST00000504905 FAM163AQ96GL9 167 aaPredicted RBP24.59■■□□□ 1.53
HERC6-205ENST00000504905 CACNB3P54284 484 aa24.58■■□□□ 1.53
HERC6-205ENST00000504905 RASA3Q14644 834 aa24.58■■□□□ 1.53
HERC6-205ENST00000504905 NAA16Q6N069 864 aaPredicted RBP24.58■■□□□ 1.53
HERC6-205ENST00000504905 ZNF384Q8TF68 577 aa24.58■■□□□ 1.53
HERC6-205ENST00000504905 DNAJC2Q99543 621 aaKnown RBP24.58■■□□□ 1.53
HERC6-205ENST00000504905 BOLA2Q9H3K6 86 aa24.58■■□□□ 1.53
HERC6-205ENST00000504905 RNF186Q9NXI6 227 aa24.58■■□□□ 1.53
HERC6-205ENST00000504905 IGSF3O75054 1194 aa24.57■■□□□ 1.52
HERC6-205ENST00000504905 IDH1O75874 414 aaKnown RBP24.57■■□□□ 1.52
HERC6-205ENST00000504905 IGHDP01880 384 aa24.57■■□□□ 1.52
HERC6-205ENST00000504905 TTF1Q15361 905 aaPredicted RBP24.57■■□□□ 1.52
HERC6-205ENST00000504905 CDC42EP5Q6NZY7 148 aa24.57■■□□□ 1.52
HERC6-205ENST00000504905 ANTXR1Q9H6X2 564 aa24.57■■□□□ 1.52
HERC6-205ENST00000504905 ECHDC1Q9NTX5 307 aa24.57■■□□□ 1.52
HERC6-205ENST00000504905 USP40Q9NVE5 1235 aa24.57■■□□□ 1.52
HERC6-205ENST00000504905 SLC10A3P09131 477 aa24.56■■□□□ 1.52
HERC6-205ENST00000504905 BTDP43251 543 aa24.56■■□□□ 1.52
HERC6-205ENST00000504905 FKBP1CQ5VVH2 108 aa24.56■■□□□ 1.52
HERC6-205ENST00000504905 PAPPA2Q9BXP8 1791 aa24.56■■□□□ 1.52
HERC6-205ENST00000504905 GOLIM4O00461 696 aa24.55■■□□□ 1.52
HERC6-205ENST00000504905 TRPA1O75762 1119 aa24.55■■□□□ 1.52
HERC6-205ENST00000504905 MAP3K12Q12852 859 aa24.55■■□□□ 1.52
HERC6-205ENST00000504905 SMC5Q8IY18 1101 aa24.55■■□□□ 1.52
HERC6-205ENST00000504905 CSRNP1Q96S65 589 aa24.55■■□□□ 1.52
HERC6-205ENST00000504905 HAUS7Q99871 368 aa24.55■■□□□ 1.52
HERC6-205ENST00000504905 GPR75-ASB3A0A0A6YYF3 556 aa24.54■■□□□ 1.52
HERC6-205ENST00000504905 SUPT20HL1Q3ZLR7 823 aa24.54■■□□□ 1.52
HERC6-205ENST00000504905 FAM83AQ86UY5 434 aa24.54■■□□□ 1.52
HERC6-205ENST00000504905 REM2Q8IYK8 340 aaPredicted RBP24.54■■□□□ 1.52
HERC6-205ENST00000504905 NOL10Q9BSC4 688 aaKnown RBP24.54■■□□□ 1.52
HERC6-205ENST00000504905 PAG1Q9NWQ8 432 aa24.54■■□□□ 1.52
HERC6-205ENST00000504905 PCDH10Q9P2E7 1040 aa24.54■■□□□ 1.52
HERC6-205ENST00000504905 FKBP1BP68106 108 aa24.53■■□□□ 1.52
HERC6-205ENST00000504905 TTLL12Q14166 644 aaPredicted RBP24.53■■□□□ 1.52
HERC6-205ENST00000504905 TMEM39BQ9GZU3 492 aa24.53■■□□□ 1.52
HERC6-205ENST00000504905 AK9Q5TCS8 1911 aa24.53■■□□□ 1.52
HERC6-205ENST00000504905 NBPF12Q5TAG4 269 aaPredicted RBP24.52■■□□□ 1.52
HERC6-205ENST00000504905 TSHZ3Q63HK5 1081 aa24.52■■□□□ 1.52
HERC6-205ENST00000504905 B4GALNT3Q6L9W6 998 aa24.52■■□□□ 1.52
HERC6-205ENST00000504905 MAGEB6Q8N7X4 407 aa24.52■■□□□ 1.52
HERC6-205ENST00000504905 TTC41PQ6P2S7 1318 aa24.52■■□□□ 1.52
HERC6-205ENST00000504905 BAG3O95817 575 aa24.51■■□□□ 1.51
HERC6-205ENST00000504905 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
HERC6-205ENST00000504905 CYP7A1P22680 504 aa24.51■■□□□ 1.51
HERC6-205ENST00000504905 TMED8Q6PL24 325 aaPredicted RBP24.51■■□□□ 1.51
HERC6-205ENST00000504905 OTUD7AQ8TE49 926 aaPredicted RBP24.51■■□□□ 1.51
HERC6-205ENST00000504905 EDC3Q96F86 508 aaKnown RBP24.51■■□□□ 1.51
HERC6-205ENST00000504905 ERC2O15083 957 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 MAP4K4O95819 1239 aaPredicted RBP24.5■■□□□ 1.51
HERC6-205ENST00000504905 MX1P20591 662 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 TCP10Q12799 353 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 NFIAQ12857 509 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 PRKG1Q13976 671 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 ARMC9Q7Z3E5 817 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 TEPSINQ96N21 525 aa24.5■■□□□ 1.51
HERC6-205ENST00000504905 MYH7P12883 1935 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms