RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 GRM8O00222 908 aa10.56□□□□□ -0.72
CASC9-201ENST00000504531 EIF2S2P20042 333 aaKnown RBP10.56□□□□□ -0.72
CASC9-201ENST00000504531 RILPL2Q969X0 211 aa10.56□□□□□ -0.72
CASC9-201ENST00000504531 TTC14Q96N46 770 aa10.56□□□□□ -0.72
CASC9-201ENST00000504531 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
CASC9-201ENST00000504531 LSG1Q9H089 658 aaKnown RBP10.56□□□□□ -0.72
CASC9-201ENST00000504531 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
CASC9-201ENST00000504531 C9orf78Q9NZ63 289 aaPredicted RBP10.56□□□□□ -0.72
CASC9-201ENST00000504531 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.56□□□□□ -0.72
CASC9-201ENST00000504531 COL18A1P39060 1754 aa10.56□□□□□ -0.72
CASC9-201ENST00000504531 WDR33Q9C0J8 1336 aaKnown RBP10.56□□□□□ -0.72
CASC9-201ENST00000504531 LETM1O95202 739 aaPredicted RBP10.55□□□□□ -0.72
CASC9-201ENST00000504531 SKIP12755 728 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 TSGA10IPQ3SY00 556 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 ZNF790Q6PG37 636 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 MPRIPQ6WCQ1 1025 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 KRT27Q7Z3Y8 459 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 IFNL2Q8IZJ0 200 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 USHBP1Q8N6Y0 703 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 ADAMTS19Q8TE59 1207 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 RAPGEF4Q8WZA2 1011 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 GLMNQ92990 594 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
CASC9-201ENST00000504531 DCAF5Q96JK2 942 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
CASC9-201ENST00000504531 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
CASC9-201ENST00000504531 MAP3K2Q9Y2U5 619 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 ATP6V1DQ9Y5K8 247 aa10.55□□□□□ -0.72
CASC9-201ENST00000504531 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
CASC9-201ENST00000504531 TTLL8A6PVC2 850 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 MAN1A2O60476 641 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 TATP17735 454 aaPredicted RBP10.54□□□□□ -0.72
CASC9-201ENST00000504531 BAG6P46379 1132 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 NEXNQ0ZGT2 675 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 VPS53Q5VIR6 699 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 PKD1L3Q7Z443 1732 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 ZMYND15Q9H091 742 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 ZNF395Q9H8N7 513 aaPredicted RBP10.54□□□□□ -0.72
CASC9-201ENST00000504531 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 PXDNQ92626 1479 aa10.54□□□□□ -0.72
CASC9-201ENST00000504531 PIK3CDO00329 1044 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 KCNQ3O43525 872 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 GNRH1P01148 92 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 SNRPA1P09661 255 aaKnown RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 IFIT2P09913 472 aaKnown RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 PHKG2P15735 406 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 PSMA5P28066 241 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 MCM5P33992 734 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.72
CASC9-201ENST00000504531 GAS2L3Q86XJ1 694 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 KDF1Q8NAX2 398 aaPredicted RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 METTL22Q9BUU2 404 aaPredicted RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 POLMQ9NP87 494 aaPredicted RBP10.53□□□□□ -0.72
CASC9-201ENST00000504531 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 SNX14Q9Y5W7 946 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 BCL9LQ86UU0 1499 aa10.53□□□□□ -0.72
CASC9-201ENST00000504531 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
CASC9-201ENST00000504531 NECTIN1Q15223 517 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 ANKRD1Q15327 319 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 EML3Q32P44 896 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 ZSCAN23Q3MJ62 389 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 RABL6Q3YEC7 729 aaPredicted RBP10.52□□□□□ -0.73
CASC9-201ENST00000504531 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 FAM184AQ8NB25 1140 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 MAP4K1Q92918 833 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 TRIM44Q96DX7 344 aaPredicted RBP10.52□□□□□ -0.73
CASC9-201ENST00000504531 PDLIM2Q96JY6 352 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 INSM2Q96T92 566 aaPredicted RBP10.52□□□□□ -0.73
CASC9-201ENST00000504531 IL1RAPL2Q9NP60 686 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 HMG20BQ9P0W2 317 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 PALD1Q9ULE6 856 aa10.52□□□□□ -0.73
CASC9-201ENST00000504531 NHSL1Q5SYE7 1610 aa10.51□□□□□ -0.73
CASC9-201ENST00000504531 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
CASC9-201ENST00000504531 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
CASC9-201ENST00000504531 OS9Q13438 667 aaPredicted RBP10.51□□□□□ -0.73
CASC9-201ENST00000504531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.51□□□□□ -0.73
CASC9-201ENST00000504531 UVSSAQ2YD98 709 aa10.51□□□□□ -0.73
CASC9-201ENST00000504531 LRP10Q7Z4F1 713 aa10.51□□□□□ -0.73
CASC9-201ENST00000504531 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
CASC9-201ENST00000504531 GPR108Q9NPR9 543 aa10.51□□□□□ -0.73
CASC9-201ENST00000504531 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
CASC9-201ENST00000504531 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
CASC9-201ENST00000504531 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 NEURL1BA8MQ27 555 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 PRPF40AO75400 957 aaKnown RBP10.5□□□□□ -0.73
CASC9-201ENST00000504531 GPC1P35052 558 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 TERF1P54274 439 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 GCKRQ14397 625 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 R3HDM1Q15032 1099 aaKnown RBP10.5□□□□□ -0.73
CASC9-201ENST00000504531 VPS72Q15906 364 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 KAZALD1Q96I82 304 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 FMNL2Q96PY5 1086 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 CYP46A1Q9Y6A2 500 aa10.5□□□□□ -0.73
CASC9-201ENST00000504531 A0A1W2PRU2 124 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms