RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SCRN1Q12765 414 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 DCTN1Q14203 1278 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ZFYVE27Q5T4F4 411 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 CCDC70Q6NSX1 233 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ANKRD13BQ86YJ7 626 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 TTC5Q8N0Z6 440 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ZCRB1Q8TBF4 217 aaKnown RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SPIRE2Q8WWL2 714 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 EZH1Q92800 747 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ZKSCAN4Q969J2 545 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SLC7A5P2Q9GIP4 190 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 LMBRD1Q9NUN5 540 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SPATA7Q9P0W8 599 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 CD163L1Q9NR16 1453 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 DTNBO60941 627 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SKAP2O75563 359 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SNUPNO95149 360 aaKnown RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 MBD3O95983 291 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SCNN1BP51168 640 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 USP11P51784 963 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 MPP3Q13368 585 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 KLHL40Q2TBA0 621 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 DPY19L2Q6NUT2 758 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 TEX11Q8IYF3 940 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SLC43A3Q8NBI5 491 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 CORO1BQ9BR76 489 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 PRDM11Q9NQV5 511 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 INIPQ9NRY2 104 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 PSD3Q9NYI0 1048 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 USP25Q9UHP3 1055 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 NFAT5O94916 1531 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 LTN1O94822 1766 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 POLR3GO15318 223 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 KIF4AO95239 1232 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SERPINC1P01008 464 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 GCFC2P16383 781 aaKnown RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 DEUP1Q05D60 604 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 CAMK2BQ13554 666 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 STK38Q15208 465 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ZNF394Q53GI3 561 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 CCDC93Q567U6 631 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SPATA21Q7Z572 469 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 VPS37DQ86XT2 251 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 PALB2Q86YC2 1186 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 CKAP2LQ8IYA6 745 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ANKRD20A12PQ8NF67 263 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 NGLY1Q96IV0 654 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 SPATA32Q96LK8 384 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 PCDH10Q9P2E7 1040 aa4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 G3BP2Q9UN86 482 aaKnown RBP4.22□□□□□ -1.73
PCDH11X-208ENST00000504220 ALDH2P05091 517 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 MYCLP1P12525 358 aaPredicted RBP4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 GUCY1B3Q02153 619 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 MYBPC3Q14896 1274 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 RABEP1Q15276 862 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 RBM26Q5T8P6 1007 aaKnown RBP4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 TSHZ3Q63HK5 1081 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 CCDC186Q7Z3E2 898 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 SMC5Q8IY18 1101 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 TMEM57Q8N5G2 664 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 PMM1Q92871 262 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 CLIC6Q96NY7 704 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 TNMDQ9H2S6 317 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 TMEM63CQ9P1W3 806 aa4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.21□□□□□ -1.73
PCDH11X-208ENST00000504220 RGPD1P0DJD0 1748 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 CPSF1Q10570 1443 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 RREB1Q92766 1687 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 CDKL5O76039 1030 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 ELF1P32519 619 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 WWC2Q6AWC2 1192 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 SULT6B1Q6IMI4 303 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 ATF7IPQ6VMQ6 1270 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 OSTM1Q86WC4 334 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 NUTM1Q86Y26 1132 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 CCDC82Q8N4S0 544 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 NBPF15Q8N660 670 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 ENOX1Q8TC92 643 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 HDAC7Q8WUI4 952 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 BICD1Q96G01 975 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 SRPK1Q96SB4 655 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 USP26Q9BXU7 913 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 KIF9Q9HAQ2 790 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 TFIP11Q9UBB9 837 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 THRAP3Q9Y2W1 955 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 ZDHHC9Q9Y397 364 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 PRR36Q9H6K5 1346 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 BCL9LQ86UU0 1499 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 RGPD5Q99666 1765 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 A0A1W2PQ67 120 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 ERC2O15083 957 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 ATP9BO43861 1147 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 MAP3K9P80192 1104 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 PDE3AQ14432 1141 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 SAFBQ15424 915 aaKnown RBP eCLIP4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 TMEM110Q86TL2 294 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 CHD1LQ86WJ1 897 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 PARP9Q8IXQ6 854 aa4.21□□□□□ -1.74
PCDH11X-208ENST00000504220 SLC7A5P1Q8MH63 180 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms