RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 HSPA8P11142 646 aaKnown RBP21.95■■□□□ 1.1
NFKB1-204ENST00000504044 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
NFKB1-204ENST00000504044 KIF1BPQ96EK5 621 aa21.95■■□□□ 1.1
NFKB1-204ENST00000504044 FAM163AQ96GL9 167 aaPredicted RBP21.95■■□□□ 1.1
NFKB1-204ENST00000504044 ZNF512BQ96KM6 892 aaPredicted RBP21.95■■□□□ 1.1
NFKB1-204ENST00000504044 DBNDD2Q9BQY9 259 aa21.95■■□□□ 1.1
NFKB1-204ENST00000504044 TMEM39BQ9GZU3 492 aa21.95■■□□□ 1.1
NFKB1-204ENST00000504044 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
NFKB1-204ENST00000504044 RAI14Q9P0K7 980 aa21.95■■□□□ 1.1
NFKB1-204ENST00000504044 MAP4K4O95819 1239 aaPredicted RBP21.94■■□□□ 1.1
NFKB1-204ENST00000504044 CACNB3P54284 484 aa21.94■■□□□ 1.1
NFKB1-204ENST00000504044 COL13A1Q5TAT6 717 aaPredicted RBP21.94■■□□□ 1.1
NFKB1-204ENST00000504044 CDC42EP5Q6NZY7 148 aa21.94■■□□□ 1.1
NFKB1-204ENST00000504044 TNS4Q8IZW8 715 aa21.94■■□□□ 1.1
NFKB1-204ENST00000504044 FAM151AQ8WW52 585 aa21.94■■□□□ 1.1
NFKB1-204ENST00000504044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.94■■□□□ 1.1
NFKB1-204ENST00000504044 RPAP1Q9BWH6 1393 aaPredicted RBP21.94■■□□□ 1.1
NFKB1-204ENST00000504044 GAKO14976 1311 aa21.93■■□□□ 1.1
NFKB1-204ENST00000504044 ZBTB48P10074 688 aaPredicted RBP21.93■■□□□ 1.1
NFKB1-204ENST00000504044 MCAMP43121 646 aa21.93■■□□□ 1.1
NFKB1-204ENST00000504044 AACSQ86V21 672 aa21.93■■□□□ 1.1
NFKB1-204ENST00000504044 MYH13Q9UKX3 1938 aa21.93■■□□□ 1.1
NFKB1-204ENST00000504044 CSADQ9Y600 493 aa21.93■■□□□ 1.1
NFKB1-204ENST00000504044 MROH7-TTC4A0A0A0MT08 1334 aa21.92■■□□□ 1.1
NFKB1-204ENST00000504044 USP2O75604 605 aaPredicted RBP21.92■■□□□ 1.1
NFKB1-204ENST00000504044 INHBEP58166 350 aa21.92■■□□□ 1.1
NFKB1-204ENST00000504044 RHPN1Q8TCX5 695 aa21.92■■□□□ 1.1
NFKB1-204ENST00000504044 TEPSINQ96N21 525 aa21.92■■□□□ 1.1
NFKB1-204ENST00000504044 CCDC8Q9H0W5 538 aaPredicted RBP21.92■■□□□ 1.1
NFKB1-204ENST00000504044 MANSC4A6NHS7 340 aaPredicted RBP21.91■■□□□ 1.1
NFKB1-204ENST00000504044 BTDP43251 543 aa21.91■■□□□ 1.1
NFKB1-204ENST00000504044 MECOMQ03112 1051 aa21.91■■□□□ 1.1
NFKB1-204ENST00000504044 C20orf194Q5TEA3 1177 aa21.91■■□□□ 1.1
NFKB1-204ENST00000504044 SPRYD7Q5W111 196 aa21.91■■□□□ 1.1
NFKB1-204ENST00000504044 EAF2Q96CJ1 260 aaPredicted RBP21.91■■□□□ 1.1
NFKB1-204ENST00000504044 CSRNP1Q96S65 589 aa21.91■■□□□ 1.1
NFKB1-204ENST00000504044 ZIC5Q96T25 663 aa21.91■■□□□ 1.1
NFKB1-204ENST00000504044 DBNLQ9UJU6 430 aaKnown RBP21.91■■□□□ 1.1
NFKB1-204ENST00000504044 IFIT2P09913 472 aaKnown RBP21.9■■□□□ 1.1
NFKB1-204ENST00000504044 MAP3K9P80192 1104 aa21.9■■□□□ 1.1
NFKB1-204ENST00000504044 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
NFKB1-204ENST00000504044 SSC5DA1L4H1 1573 aa21.9■■□□□ 1.1
NFKB1-204ENST00000504044 ENTPD3O75355 529 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 BAG3O95817 575 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 ALDH1A1P00352 501 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 PLCG2P16885 1265 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 TMED8Q6PL24 325 aaPredicted RBP21.89■■□□□ 1.09
NFKB1-204ENST00000504044 PI16Q6UXB8 463 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 NSUN4Q96CB9 384 aaKnown RBP21.89■■□□□ 1.09
NFKB1-204ENST00000504044 IDI2Q9BXS1 227 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 ZNF341Q9BYN7 854 aa21.89■■□□□ 1.09
NFKB1-204ENST00000504044 GPR75-ASB3A0A0A6YYF3 556 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 APBB1O00213 710 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 RRP1P56182 461 aaKnown RBP21.88■■□□□ 1.09
NFKB1-204ENST00000504044 TCP10Q12799 353 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 MKRN3Q13064 507 aaKnown RBP21.88■■□□□ 1.09
NFKB1-204ENST00000504044 OTUD7BQ6GQQ9 843 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 NAA16Q6N069 864 aaPredicted RBP21.88■■□□□ 1.09
NFKB1-204ENST00000504044 TBC1D9Q6ZT07 1266 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 ZSCAN29Q8IWY8 852 aaPredicted RBP21.88■■□□□ 1.09
NFKB1-204ENST00000504044 WNK4Q96J92 1243 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 IL1RAPL2Q9NP60 686 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 SNRKQ9NRH2 765 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 RNF186Q9NXI6 227 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 FZD1Q9UP38 647 aa21.88■■□□□ 1.09
NFKB1-204ENST00000504044 TRPA1O75762 1119 aa21.87■■□□□ 1.09
NFKB1-204ENST00000504044 TM4SF4P48230 202 aa21.87■■□□□ 1.09
NFKB1-204ENST00000504044 CERS3Q8IU89 383 aa21.87■■□□□ 1.09
NFKB1-204ENST00000504044 TTF1Q15361 905 aaPredicted RBP21.86■■□□□ 1.09
NFKB1-204ENST00000504044 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
NFKB1-204ENST00000504044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.86■■□□□ 1.09
NFKB1-204ENST00000504044 CLMNQ96JQ2 1002 aa21.86■■□□□ 1.09
NFKB1-204ENST00000504044 WRNIP1Q96S55 665 aa21.86■■□□□ 1.09
NFKB1-204ENST00000504044 ELP3Q9H9T3 547 aa21.86■■□□□ 1.09
NFKB1-204ENST00000504044 TLR7Q9NYK1 1049 aaKnown RBP21.86■■□□□ 1.09
NFKB1-204ENST00000504044 TSKSQ9UJT2 592 aa21.86■■□□□ 1.09
NFKB1-204ENST00000504044 ZAP70P43403 619 aa21.85■■□□□ 1.09
NFKB1-204ENST00000504044 RGS3P49796 1198 aa21.85■■□□□ 1.09
NFKB1-204ENST00000504044 NFIAQ12857 509 aa21.85■■□□□ 1.09
NFKB1-204ENST00000504044 SIRT2Q8IXJ6 389 aa21.85■■□□□ 1.09
NFKB1-204ENST00000504044 NPM3O75607 178 aaKnown RBP21.84■■□□□ 1.09
NFKB1-204ENST00000504044 CYP2E1P05181 493 aaPredicted RBP21.84■■□□□ 1.09
NFKB1-204ENST00000504044 MAP3K12Q12852 859 aa21.84■■□□□ 1.09
NFKB1-204ENST00000504044 PICALMQ13492 652 aa21.84■■□□□ 1.09
NFKB1-204ENST00000504044 CDAN1Q8IWY9 1227 aa21.84■■□□□ 1.09
NFKB1-204ENST00000504044 OPTNQ96CV9 577 aa21.84■■□□□ 1.09
NFKB1-204ENST00000504044 LRRCC1Q9C099 1032 aa21.84■■□□□ 1.09
NFKB1-204ENST00000504044 FAM198AQ9UFP1 575 aa21.84■■□□□ 1.09
NFKB1-204ENST00000504044 IDH1O75874 414 aaKnown RBP21.83■■□□□ 1.09
NFKB1-204ENST00000504044 VGLL4Q14135 290 aa21.83■■□□□ 1.09
NFKB1-204ENST00000504044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.83■■□□□ 1.09
NFKB1-204ENST00000504044 WDHD1O75717 1129 aaPredicted RBP21.82■■□□□ 1.08
NFKB1-204ENST00000504044 GTF2A2P52657 109 aa21.82■■□□□ 1.08
NFKB1-204ENST00000504044 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.82■■□□□ 1.08
NFKB1-204ENST00000504044 MIGA2Q7L4E1 593 aa21.82■■□□□ 1.08
NFKB1-204ENST00000504044 ERO1BQ86YB8 467 aa21.82■■□□□ 1.08
NFKB1-204ENST00000504044 TEX11Q8IYF3 940 aa21.82■■□□□ 1.08
NFKB1-204ENST00000504044 BCL11AQ9H165 835 aa21.82■■□□□ 1.08
NFKB1-204ENST00000504044 SPDYE5A6NIY4 337 aa21.8■■□□□ 1.08
NFKB1-204ENST00000504044 RHBDL3P58872 404 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms