RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ALDH1B1P30837 517 aa11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 MAGEA9P43362 315 aa11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 IFIT5Q13325 482 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 ZRSR2Q15696 482 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 TTC19Q6DKK2 380 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 CDC5LQ99459 802 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
PDLIM5-207ENST00000503974 A0A0G2JLW4 131 aa11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 SRGAP3O43295 1099 aa11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 PTPN12Q05209 780 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 CCDC57Q2TAC2 916 aa11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 CNKSR1Q969H4 720 aa11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 FAXDC2Q96IV6 333 aa11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-207ENST00000503974 ABCD1P33897 745 aa11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 ADCY2Q08462 1091 aa11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 BMS1Q14692 1282 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 KRBA2Q6ZNG9 492 aa11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 TMC4Q7Z404 712 aa11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 GPT2Q8TD30 523 aa11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 CWC15Q9P013 229 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-207ENST00000503974 BBOX1O75936 387 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 C7orf43Q8WVR3 580 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 PIM2Q9P1W9 311 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 RRP15Q9Y3B9 282 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 RAB3GAP1Q15042 981 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 RABEP1Q15276 862 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
PDLIM5-207ENST00000503974 DUOX1Q9NRD9 1551 aa11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 HMMRO75330 724 aa11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 CIAO1O76071 339 aa11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 SKILP12757 684 aa11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 IGHMBP2P38935 993 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 NAIF1Q69YI7 327 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 MAF1Q9H063 256 aa11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 FER1L6Q2WGJ9 1857 aa11.19□□□□□ -0.62
PDLIM5-207ENST00000503974 MMS22LQ6ZRQ5 1243 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 KLHDC4Q8TBB5 520 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 EYA2O00167 538 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 C21orf2O43822 256 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 KINO60870 393 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ERCC3P19447 782 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 DALRD3Q5D0E6 543 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 CLEC17AQ6ZS10 378 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ATG9AQ7Z3C6 839 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 SP8Q8IXZ3 490 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ST7Q9NRC1 585 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 PA2G4Q9UQ80 394 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ATP6V0A2Q9Y487 856 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 RIPOR2Q9Y4F9 1068 aa11.18□□□□□ -0.62
PDLIM5-207ENST00000503974 ZSCAN23Q3MJ62 389 aa11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 TACO1Q9BSH4 297 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 PUS3Q9BZE2 481 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 ZNF232Q9UNY5 417 aa11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
PDLIM5-207ENST00000503974 TRAF1Q13077 416 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 LRRC24Q50LG9 513 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 LDHAL6AQ6ZMR3 332 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 TRIM74Q86UV6 250 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 TRIM73Q86UV7 250 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 MIEF2Q96C03 454 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 DCTPP1Q9H773 170 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 PPFIA2O75334 1257 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 MAGEA8P43361 318 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 NEK11Q8NG66 645 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 MROH5Q6ZUA9 1318 aa11.16□□□□□ -0.62
PDLIM5-207ENST00000503974 CPP00450 1065 aa11.15□□□□□ -0.62
PDLIM5-207ENST00000503974 SOGA3Q5TF21 947 aa11.15□□□□□ -0.62
PDLIM5-207ENST00000503974 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
PDLIM5-207ENST00000503974 IQUBQ8NA54 791 aa11.15□□□□□ -0.62
PDLIM5-207ENST00000503974 FBXO18Q8NFZ0 1043 aa11.15□□□□□ -0.62
PDLIM5-207ENST00000503974 RANBP17Q9H2T7 1088 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-207ENST00000503974 SURF6O75683 361 aaKnown RBP11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 ECEL1O95672 775 aa11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 CHRNDQ07001 517 aa11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 TEX35Q5T0J7 233 aa11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 SMC5Q8IY18 1101 aa11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 CNNM1Q9NRU3 951 aa11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 XDHP47989 1333 aa11.15□□□□□ -0.63
PDLIM5-207ENST00000503974 SASH1O94885 1247 aa11.14□□□□□ -0.63
PDLIM5-207ENST00000503974 IGHDP01880 384 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms