RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 PPP1R12BO60237 982 aaPredicted RBP23.45■■□□□ 1.34
CTDSP1-213ENST00000496785 PRAMEF18Q5VWM3 479 aa23.45■■□□□ 1.34
CTDSP1-213ENST00000496785 JMYQ8N9B5 988 aa23.45■■□□□ 1.34
CTDSP1-213ENST00000496785 RWDD1Q9H446 243 aaPredicted RBP23.45■■□□□ 1.34
CTDSP1-213ENST00000496785 MYH2Q9UKX2 1941 aa23.45■■□□□ 1.34
CTDSP1-213ENST00000496785 MAST2Q6P0Q8 1798 aa23.45■■□□□ 1.34
CTDSP1-213ENST00000496785 NAA16Q6N069 864 aaPredicted RBP23.44■■□□□ 1.34
CTDSP1-213ENST00000496785 CDC42EP5Q6NZY7 148 aa23.44■■□□□ 1.34
CTDSP1-213ENST00000496785 USP40Q9NVE5 1235 aa23.44■■□□□ 1.34
CTDSP1-213ENST00000496785 RPAP1Q9BWH6 1393 aaPredicted RBP23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 ATP5JP18859 108 aa23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 BTDP43251 543 aa23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 VEGFBP49765 207 aa23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 MAP3K12Q12852 859 aa23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 CAPNS2Q96L46 248 aa23.43■■□□□ 1.34
CTDSP1-213ENST00000496785 WDR33Q9C0J8 1336 aaKnown RBP23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 GPR75-ASB3A0A0A6YYF3 556 aa23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 BAG3O95817 575 aa23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 CACNB3P54284 484 aa23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 RGMBQ6NW40 437 aa23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 CCDC102AQ96A19 550 aa23.42■■□□□ 1.34
CTDSP1-213ENST00000496785 IDH1O75874 414 aaKnown RBP23.41■■□□□ 1.34
CTDSP1-213ENST00000496785 PLCG2P16885 1265 aa23.41■■□□□ 1.34
CTDSP1-213ENST00000496785 FAM151AQ8WW52 585 aa23.41■■□□□ 1.34
CTDSP1-213ENST00000496785 PIH1D3Q9NQM4 214 aaKnown RBP23.41■■□□□ 1.34
CTDSP1-213ENST00000496785 ECHDC1Q9NTX5 307 aa23.41■■□□□ 1.34
CTDSP1-213ENST00000496785 UNCXA6NJT0 531 aa23.4■■□□□ 1.34
CTDSP1-213ENST00000496785 NBPF12Q5TAG4 269 aaPredicted RBP23.4■■□□□ 1.34
CTDSP1-213ENST00000496785 CYP4F22Q6NT55 531 aa23.4■■□□□ 1.34
CTDSP1-213ENST00000496785 DNAJC2Q99543 621 aaKnown RBP23.4■■□□□ 1.34
CTDSP1-213ENST00000496785 IDI2Q9BXS1 227 aa23.4■■□□□ 1.34
CTDSP1-213ENST00000496785 TMEM39BQ9GZU3 492 aa23.4■■□□□ 1.34
CTDSP1-213ENST00000496785 CEP350Q5VT06 3117 aa23.39■■□□□ 1.34
CTDSP1-213ENST00000496785 ENTPD3O75355 529 aa23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 IREB2P48200 963 aaKnown RBP23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 ZNF157P51786 506 aaPredicted RBP23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 GRM1Q13255 1194 aa23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 MAP3K11Q16584 847 aa23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 ZNF384Q8TF68 577 aa23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 ANGEL1Q9UNK9 670 aaKnown RBP23.39■■□□□ 1.33
CTDSP1-213ENST00000496785 NOGQ13253 232 aa23.38■■□□□ 1.33
CTDSP1-213ENST00000496785 TEPSINQ96N21 525 aa23.38■■□□□ 1.33
CTDSP1-213ENST00000496785 HAUS7Q99871 368 aa23.38■■□□□ 1.33
CTDSP1-213ENST00000496785 BOLA2Q9H3K6 86 aa23.38■■□□□ 1.33
CTDSP1-213ENST00000496785 PAG1Q9NWQ8 432 aa23.38■■□□□ 1.33
CTDSP1-213ENST00000496785 TTC41PQ6P2S7 1318 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 SSC5DA1L4H1 1573 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 UBE2Q2LH0YL09 131 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 GOLIM4O00461 696 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 NPM3O75607 178 aaKnown RBP23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 MAP2K2P36507 400 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 PRKG1Q13976 671 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 ANKRD45Q5TZF3 282 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 DCAF15Q66K64 600 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 NDUFB9Q9Y6M9 179 aa23.37■■□□□ 1.33
CTDSP1-213ENST00000496785 DOCK2Q92608 1830 aa23.36■■□□□ 1.33
CTDSP1-213ENST00000496785 ERC2O15083 957 aa23.36■■□□□ 1.33
CTDSP1-213ENST00000496785 CYP7A1P22680 504 aa23.36■■□□□ 1.33
CTDSP1-213ENST00000496785 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.36■■□□□ 1.33
CTDSP1-213ENST00000496785 RFX7Q2KHR2 1363 aa23.36■■□□□ 1.33
CTDSP1-213ENST00000496785 RGS3P49796 1198 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 RHBDL3P58872 404 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 PPP4CP60510 307 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 MAP2K1Q02750 393 aaPredicted RBP23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 TCP10Q12799 353 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 NFIAQ12857 509 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 MOB2Q70IA6 237 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 MAGEB6Q8N7X4 407 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 FAM198AQ9UFP1 575 aa23.35■■□□□ 1.33
CTDSP1-213ENST00000496785 THSD7BQ9C0I4 1608 aa23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 WDHD1O75717 1129 aaPredicted RBP23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 SLC10A3P09131 477 aa23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 LDLRAD1Q5T700 205 aa23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 SMC5Q8IY18 1101 aa23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 TEX11Q8IYF3 940 aa23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 ANKRD13AQ8IZ07 590 aa23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 AATFQ9NY61 560 aaKnown RBP eCLIP23.34■■□□□ 1.33
CTDSP1-213ENST00000496785 IRX6P78412 446 aaPredicted RBP23.33■■□□□ 1.33
CTDSP1-213ENST00000496785 ZSCAN25Q6NSZ9 544 aa23.33■■□□□ 1.33
CTDSP1-213ENST00000496785 ZSCAN29Q8IWY8 852 aaPredicted RBP23.33■■□□□ 1.33
CTDSP1-213ENST00000496785 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 GLRX3O76003 335 aaKnown RBP23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 MX1P20591 662 aa23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 PICALMQ13492 652 aa23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 SLC9C2Q5TAH2 1124 aa23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 RASAL3Q86YV0 1011 aa23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 REM2Q8IYK8 340 aaPredicted RBP23.32■■□□□ 1.32
CTDSP1-213ENST00000496785 COL2A1P02458 1487 aaPredicted RBP23.31■■□□□ 1.32
CTDSP1-213ENST00000496785 SLC10A4Q96EP9 437 aa23.31■■□□□ 1.32
CTDSP1-213ENST00000496785 BEGAINQ9BUH8 593 aa23.31■■□□□ 1.32
CTDSP1-213ENST00000496785 ZNF341Q9BYN7 854 aa23.31■■□□□ 1.32
CTDSP1-213ENST00000496785 MYO5AQ9Y4I1 1855 aaKnown RBP23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 FAM155AB1AL88 458 aaPredicted RBP23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 PDE6AP16499 860 aa23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 LRRFIP1Q32MZ4 808 aaKnown RBP23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 ADGRA1Q86SQ6 560 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms