RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 TDRD3Q9H7E2 651 aaKnown RBP9.28□□□□□ -0.92
CDHR3-214ENST00000496633 CLRN2A0PK11 232 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 ENTPD3O75355 529 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 PRDX5P30044 214 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 ADORA1P30542 326 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 CTCFP49711 727 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-214ENST00000496633 SREBF2Q12772 1141 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 MAP3K12Q12852 859 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 LRRFIP1Q32MZ4 808 aaKnown RBP9.27□□□□□ -0.93
CDHR3-214ENST00000496633 AACSQ86V21 672 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-214ENST00000496633 ANKRD13AQ8IZ07 590 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 FAM151AQ8WW52 585 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 HMG20BQ9P0W2 317 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 EXOC6BQ9Y2D4 811 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 GAKO14976 1311 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 ASTN2O75129 1339 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-214ENST00000496633 THSD7BQ9C0I4 1608 aa9.27□□□□□ -0.93
CDHR3-214ENST00000496633 WDHD1O75717 1129 aaPredicted RBP9.26□□□□□ -0.93
CDHR3-214ENST00000496633 ALDH1A1P00352 501 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 SLC10A3P09131 477 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 HSPA1AP0DMV8 641 aaKnown RBP9.26□□□□□ -0.93
CDHR3-214ENST00000496633 HSPA1BP0DMV9 641 aaKnown RBP9.26□□□□□ -0.93
CDHR3-214ENST00000496633 ZBTB48P10074 688 aaPredicted RBP9.26□□□□□ -0.93
CDHR3-214ENST00000496633 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 CYP4F22Q6NT55 531 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 APOBEC3HQ6NTF7 200 aaKnown RBP9.26□□□□□ -0.93
CDHR3-214ENST00000496633 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 DBNDD2Q9BQY9 259 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 IDI2Q9BXS1 227 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 PRDM10Q9NQV6 1147 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 WBP1LQ9NX94 342 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 SAGE1Q9NXZ1 904 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 RAI14Q9P0K7 980 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 ANGEL1Q9UNK9 670 aaKnown RBP9.26□□□□□ -0.93
CDHR3-214ENST00000496633 DAGLAQ9Y4D2 1042 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 CSADQ9Y600 493 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 MROH7-TTC4A0A0A0MT08 1334 aa9.26□□□□□ -0.93
CDHR3-214ENST00000496633 GPR75-ASB3A0A0A6YYF3 556 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 TCP10L2B9ZVM9 353 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 MCAMP43121 646 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 MECOMQ03112 1051 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 GRM1Q13255 1194 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 LDLRAD1Q5T700 205 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 NAA16Q6N069 864 aaPredicted RBP9.25□□□□□ -0.93
CDHR3-214ENST00000496633 HOMEZQ8IX15 550 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 EAF2Q96CJ1 260 aaPredicted RBP9.25□□□□□ -0.93
CDHR3-214ENST00000496633 GCC1Q96CN9 775 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDHR3-214ENST00000496633 USP40Q9NVE5 1235 aa9.25□□□□□ -0.93
CDHR3-214ENST00000496633 DBNLQ9UJU6 430 aaKnown RBP9.25□□□□□ -0.93
CDHR3-214ENST00000496633 MANSC4A6NHS7 340 aaPredicted RBP9.24□□□□□ -0.93
CDHR3-214ENST00000496633 FMR1Q06787 632 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDHR3-214ENST00000496633 ZSCAN25Q6NSZ9 544 aa9.24□□□□□ -0.93
CDHR3-214ENST00000496633 CDC42EP5Q6NZY7 148 aa9.24□□□□□ -0.93
CDHR3-214ENST00000496633 SAMD1Q6SPF0 538 aaPredicted RBP9.24□□□□□ -0.93
CDHR3-214ENST00000496633 NSUN4Q96CB9 384 aaKnown RBP9.24□□□□□ -0.93
CDHR3-214ENST00000496633 ZNF341Q9BYN7 854 aa9.24□□□□□ -0.93
CDHR3-214ENST00000496633 CCDC8Q9H0W5 538 aaPredicted RBP9.24□□□□□ -0.93
CDHR3-214ENST00000496633 DHX36Q9H2U1 1008 aaKnown RBP9.24□□□□□ -0.93
CDHR3-214ENST00000496633 DCTPP1Q9H773 170 aa9.24□□□□□ -0.93
CDHR3-214ENST00000496633 MYH2Q9UKX2 1941 aa9.24□□□□□ -0.93
CDHR3-214ENST00000496633 COL2A1P02458 1487 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-214ENST00000496633 FAM155AB1AL88 458 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-214ENST00000496633 UBE2Q2LH0YL09 131 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 ERC2O15083 957 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 ATP5JP18859 108 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 BTDP43251 543 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 PPP4CP60510 307 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 MAP3K9P80192 1104 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 DIXDC1Q155Q3 683 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 NBPF12Q5TAG4 269 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-214ENST00000496633 C20orf194Q5TEA3 1177 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 RASAL3Q86YV0 1011 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 TEPSINQ96N21 525 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
CDHR3-214ENST00000496633 MAST2Q6P0Q8 1798 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 TBC1D12O60347 775 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 USP2O75604 605 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 IDH1O75874 414 aaKnown RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 TM4SF4P48230 202 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 HDAC1Q13547 482 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 GRIK5Q16478 980 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 PRAMEF18Q5VWM3 479 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 TICAM2Q86XR7 235 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 ZSCAN29Q8IWY8 852 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 TMEM39BQ9GZU3 492 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 RWDD1Q9H446 243 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 ZCCHC17Q9NP64 241 aaKnown RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 ECHDC1Q9NTX5 307 aa9.22□□□□□ -0.93
CDHR3-214ENST00000496633 HERC5Q9UII4 1024 aaKnown RBP9.22□□□□□ -0.93
CDHR3-214ENST00000496633 AKAP11Q9UKA4 1901 aa9.21□□□□□ -0.93
CDHR3-214ENST00000496633 SPDYE4A6NLX3 237 aa9.21□□□□□ -0.94
CDHR3-214ENST00000496633 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms