RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 LDHDQ86WU2 507 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 AATFQ9NY61 560 aaKnown RBP eCLIP10.24□□□□□ -0.77
U2AF1-212ENST00000496462 GPRC5DQ9NZD1 345 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 FZD9O00144 591 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 SNAP23O00161 211 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 RAD21O60216 631 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 TBC1D9Q6ZT07 1266 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 MIGA1Q8NAN2 632 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 AS3MTQ9HBK9 375 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 MROH7-TTC4A0A0A0MT08 1334 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 MCAMP43121 646 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 OTUD7BQ6GQQ9 843 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 FEZ1Q99689 392 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 ARPP21Q9UBL0 812 aaPredicted RBP10.24□□□□□ -0.77
U2AF1-212ENST00000496462 TCP10L2B9ZVM9 353 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 SDSP20132 328 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 HTRA3P83110 453 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 MECOMQ03112 1051 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 IQCA1Q86XH1 822 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 UBAC1Q9BSL1 405 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 CNNM2Q9H8M5 875 aa10.24□□□□□ -0.77
U2AF1-212ENST00000496462 SLX4Q8IY92 1834 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
U2AF1-212ENST00000496462 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 ENTPD3O75355 529 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 ATP2B2Q01814 1243 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 RRP12Q5JTH9 1297 aaKnown RBP10.23□□□□□ -0.77
U2AF1-212ENST00000496462 FOXP4Q8IVH2 680 aaPredicted RBP10.23□□□□□ -0.77
U2AF1-212ENST00000496462 VGLL2Q8N8G2 317 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 CLRN2A0PK11 232 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 HSPA6P17066 643 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 SCARF1Q14162 830 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 CHADLQ6NUI6 762 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 NFXL1Q6ZNB6 911 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 ABT1Q9ULW3 272 aaKnown RBP10.23□□□□□ -0.77
U2AF1-212ENST00000496462 RFX7Q2KHR2 1363 aa10.23□□□□□ -0.77
U2AF1-212ENST00000496462 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 KRT23Q9C075 422 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 SWAP70Q9UH65 585 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 KIF3AQ9Y496 699 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 ADD2P35612 726 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 AKAP17AQ02040 695 aaKnown RBP10.22□□□□□ -0.77
U2AF1-212ENST00000496462 BECN1Q14457 450 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 KIF13BQ9NQT8 1826 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 HMGB1P09429 215 aaKnown RBP10.22□□□□□ -0.77
U2AF1-212ENST00000496462 IKQ13123 557 aaPredicted RBP10.22□□□□□ -0.77
U2AF1-212ENST00000496462 PABPC4Q13310 644 aaKnown RBP eCLIP10.22□□□□□ -0.77
U2AF1-212ENST00000496462 TSHZ3Q63HK5 1081 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 MFSD6Q6ZSS7 791 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 ZNF341Q9BYN7 854 aa10.22□□□□□ -0.77
U2AF1-212ENST00000496462 TLR7Q9NYK1 1049 aaKnown RBP10.22□□□□□ -0.77
U2AF1-212ENST00000496462 BCORQ6W2J9 1755 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 GPAA1O43292 621 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 PRDX5P30044 214 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 FKBP1CQ5VVH2 108 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 GIMAP6Q6P9H5 292 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 CCDC17Q96LX7 622 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 ZDHHC15Q96MV8 337 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.21□□□□□ -0.77
U2AF1-212ENST00000496462 GGA3Q9NZ52 723 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 PI4KBQ9UBF8 816 aa10.21□□□□□ -0.77
U2AF1-212ENST00000496462 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.78
U2AF1-212ENST00000496462 PCP11498 1178 aaKnown RBP10.21□□□□□ -0.78
U2AF1-212ENST00000496462 ANP32AP39687 249 aaKnown RBP10.21□□□□□ -0.78
U2AF1-212ENST00000496462 TCP10Q12799 353 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 GRM1Q13255 1194 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 ESR2Q92731 530 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 ARMT1Q9H993 441 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 POTEIP0CG38 1075 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 POTEJP0CG39 1038 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 ECE1P42892 770 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 TRAF1Q13077 416 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 TDRD3Q9H7E2 651 aaKnown RBP10.21□□□□□ -0.78
U2AF1-212ENST00000496462 CEP350Q5VT06 3117 aa10.21□□□□□ -0.78
U2AF1-212ENST00000496462 ANKRD36CQ5JPF3 1778 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 TSPY2A6NKD2 308 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 CYP2E1P05181 493 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 NMIQ13287 307 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 ANGEL2Q5VTE6 544 aaKnown RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 TXNRD3Q86VQ6 643 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 CSRNP1Q96S65 589 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 ARHGEF10LQ9HCE6 1279 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 TMOD4Q9NZQ9 345 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 ZNF70Q9UC06 446 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 ST18O60284 1047 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 ARHGEF6Q15052 776 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 DIXDC1Q155Q3 683 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 RBM46Q8TBY0 533 aaKnown RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 FAM151AQ8WW52 585 aa10.2□□□□□ -0.78
U2AF1-212ENST00000496462 TAF1DQ9H5J8 278 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 PIH1D3Q9NQM4 214 aaKnown RBP10.2□□□□□ -0.78
U2AF1-212ENST00000496462 KLRK1P26718 216 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms