RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
PDAP1-204ENST00000496335 SNRKQ9NRH2 765 aa17.81■□□□□ 0.44
PDAP1-204ENST00000496335 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
PDAP1-204ENST00000496335 CASP8AP2Q9UKL3 1982 aa17.8■□□□□ 0.44
PDAP1-204ENST00000496335 UQCRFS1P1P0C7P4 283 aa17.8■□□□□ 0.44
PDAP1-204ENST00000496335 IREB2P48200 963 aaKnown RBP17.8■□□□□ 0.44
PDAP1-204ENST00000496335 TTC39AQ5SRH9 613 aa17.8■□□□□ 0.44
PDAP1-204ENST00000496335 FKBP1CQ5VVH2 108 aa17.8■□□□□ 0.44
PDAP1-204ENST00000496335 SPTY2D1Q68D10 685 aaPredicted RBP17.8■□□□□ 0.44
PDAP1-204ENST00000496335 RPAP2Q8IXW5 612 aaPredicted RBP17.8■□□□□ 0.44
PDAP1-204ENST00000496335 EAF2Q96CJ1 260 aaPredicted RBP17.8■□□□□ 0.44
PDAP1-204ENST00000496335 SLC10A4Q96EP9 437 aa17.8■□□□□ 0.44
PDAP1-204ENST00000496335 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
PDAP1-204ENST00000496335 DBNLQ9UJU6 430 aaKnown RBP17.8■□□□□ 0.44
PDAP1-204ENST00000496335 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 CA12O43570 354 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 MECOMQ03112 1051 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 NFIAQ12857 509 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 CCDC158Q5M9N0 1113 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 FAM83AQ86UY5 434 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 ZNF384Q8TF68 577 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
PDAP1-204ENST00000496335 MYO5AQ9Y4I1 1855 aaKnown RBP17.78■□□□□ 0.44
PDAP1-204ENST00000496335 APBB1O00213 710 aa17.78■□□□□ 0.44
PDAP1-204ENST00000496335 TRPA1O75762 1119 aa17.78■□□□□ 0.44
PDAP1-204ENST00000496335 TCP10Q12799 353 aa17.78■□□□□ 0.44
PDAP1-204ENST00000496335 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
PDAP1-204ENST00000496335 SPRYD7Q5W111 196 aa17.78■□□□□ 0.44
PDAP1-204ENST00000496335 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
PDAP1-204ENST00000496335 IL1RAPL2Q9NP60 686 aa17.78■□□□□ 0.44
PDAP1-204ENST00000496335 GAKO14976 1311 aa17.77■□□□□ 0.44
PDAP1-204ENST00000496335 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
PDAP1-204ENST00000496335 ANKRD13AQ8IZ07 590 aa17.77■□□□□ 0.44
PDAP1-204ENST00000496335 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
PDAP1-204ENST00000496335 HMMRO75330 724 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 AACSQ86V21 672 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 SLF2Q8IX21 1173 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
PDAP1-204ENST00000496335 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 FAM151AQ8WW52 585 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 NSUN4Q96CB9 384 aaKnown RBP17.76■□□□□ 0.43
PDAP1-204ENST00000496335 FAM163AQ96GL9 167 aaPredicted RBP17.76■□□□□ 0.43
PDAP1-204ENST00000496335 WNK4Q96J92 1243 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 FAM198AQ9UFP1 575 aa17.76■□□□□ 0.43
PDAP1-204ENST00000496335 MROH7-TTC4A0A0A0MT08 1334 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 UNCXA6NJT0 531 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 BTDP43251 543 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 ZAP70P43403 619 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.75■□□□□ 0.43
PDAP1-204ENST00000496335 ZNF512BQ96KM6 892 aaPredicted RBP17.75■□□□□ 0.43
PDAP1-204ENST00000496335 BCL11AQ9H165 835 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 ELP3Q9H9T3 547 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 SAGE1Q9NXZ1 904 aa17.75■□□□□ 0.43
PDAP1-204ENST00000496335 CYP2E1P05181 493 aaPredicted RBP17.74■□□□□ 0.43
PDAP1-204ENST00000496335 GJA5P36382 358 aa17.74■□□□□ 0.43
PDAP1-204ENST00000496335 TM4SF4P48230 202 aa17.74■□□□□ 0.43
PDAP1-204ENST00000496335 RGS3P49796 1198 aa17.74■□□□□ 0.43
PDAP1-204ENST00000496335 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
PDAP1-204ENST00000496335 MIGA2Q7L4E1 593 aa17.74■□□□□ 0.43
PDAP1-204ENST00000496335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.74■□□□□ 0.436e-18■■■□□ 15
PDAP1-204ENST00000496335 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
PDAP1-204ENST00000496335 GPR75-ASB3A0A0A6YYF3 556 aa17.73■□□□□ 0.43
PDAP1-204ENST00000496335 WDHD1O75717 1129 aaPredicted RBP17.73■□□□□ 0.43
PDAP1-204ENST00000496335 GSTO1P78417 241 aa17.73■□□□□ 0.43
PDAP1-204ENST00000496335 VGLL4Q14135 290 aa17.73■□□□□ 0.43
PDAP1-204ENST00000496335 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
PDAP1-204ENST00000496335 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
PDAP1-204ENST00000496335 PIH1D3Q9NQM4 214 aaKnown RBP17.73■□□□□ 0.43
PDAP1-204ENST00000496335 NDUFB9Q9Y6M9 179 aa17.73■□□□□ 0.43
PDAP1-204ENST00000496335 LDHCP07864 332 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 ZBTB48P10074 688 aaPredicted RBP17.72■□□□□ 0.43
PDAP1-204ENST00000496335 RHBDL3P58872 404 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 ZKSCAN4Q969J2 545 aaPredicted RBP17.72■□□□□ 0.43
PDAP1-204ENST00000496335 OPTNQ96CV9 577 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 HOOK2Q96ED9 719 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
PDAP1-204ENST00000496335 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
PDAP1-204ENST00000496335 RFX7Q2KHR2 1363 aa17.71■□□□□ 0.43
PDAP1-204ENST00000496335 TBC1D8O95759 1140 aa17.71■□□□□ 0.43
PDAP1-204ENST00000496335 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
PDAP1-204ENST00000496335 PICALMQ13492 652 aa17.71■□□□□ 0.43
PDAP1-204ENST00000496335 DCAF15Q66K64 600 aa17.71■□□□□ 0.43
PDAP1-204ENST00000496335 CLASRPQ8N2M8 674 aaKnown RBP17.71■□□□□ 0.43
PDAP1-204ENST00000496335 ZNF341Q9BYN7 854 aa17.71■□□□□ 0.43
PDAP1-204ENST00000496335 CSADQ9Y600 493 aa17.71■□□□□ 0.43
PDAP1-204ENST00000496335 MANSC4A6NHS7 340 aaPredicted RBP17.7■□□□□ 0.42
PDAP1-204ENST00000496335 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
PDAP1-204ENST00000496335 ENTPD3O75355 529 aa17.7■□□□□ 0.42
PDAP1-204ENST00000496335 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
PDAP1-204ENST00000496335 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
PDAP1-204ENST00000496335 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
PDAP1-204ENST00000496335 LAMB1P07942 1786 aa17.7■□□□□ 0.42
PDAP1-204ENST00000496335 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
PDAP1-204ENST00000496335 MAST2Q6P0Q8 1798 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms