RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 FAM83AQ86UY5 434 aa19.98■□□□□ 0.79
SF3A1-209ENST00000496189 USP40Q9NVE5 1235 aa19.98■□□□□ 0.79
SF3A1-209ENST00000496189 ANGEL1Q9UNK9 670 aaKnown RBP19.98■□□□□ 0.79
SF3A1-209ENST00000496189 IREB2P48200 963 aaKnown RBP19.97■□□□□ 0.79
SF3A1-209ENST00000496189 TBC1D9Q6ZT07 1266 aa19.97■□□□□ 0.79
SF3A1-209ENST00000496189 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
SF3A1-209ENST00000496189 MROH7-TTC4A0A0A0MT08 1334 aa19.97■□□□□ 0.79
SF3A1-209ENST00000496189 UBE2Q2LH0YL09 131 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 ZAP70P43403 619 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 CACNB3P54284 484 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 CDC42EP5Q6NZY7 148 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 FAM163AQ96GL9 167 aaPredicted RBP19.96■□□□□ 0.79
SF3A1-209ENST00000496189 PCDHB15Q9Y5E8 787 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 AOX1Q06278 1338 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 MYH2Q9UKX2 1941 aa19.96■□□□□ 0.79
SF3A1-209ENST00000496189 MAP4K4O95819 1239 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 HSPA1AP0DMV8 641 aaKnown RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 HSPA1BP0DMV9 641 aaKnown RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 BTDP43251 543 aa19.95■□□□□ 0.78
SF3A1-209ENST00000496189 TTF1Q15361 905 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 NBPF12Q5TAG4 269 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 NAA16Q6N069 864 aaPredicted RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 NSUN4Q96CB9 384 aaKnown RBP19.95■□□□□ 0.78
SF3A1-209ENST00000496189 GPATCH3Q96I76 525 aa19.95■□□□□ 0.78
SF3A1-209ENST00000496189 TMEM39BQ9GZU3 492 aa19.95■□□□□ 0.78
SF3A1-209ENST00000496189 DCTPP1Q9H773 170 aa19.95■□□□□ 0.78
SF3A1-209ENST00000496189 GAKO14976 1311 aa19.95■□□□□ 0.78
SF3A1-209ENST00000496189 UNCXA6NJT0 531 aa19.94■□□□□ 0.78
SF3A1-209ENST00000496189 BAG3O95817 575 aa19.94■□□□□ 0.78
SF3A1-209ENST00000496189 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
SF3A1-209ENST00000496189 DCAF15Q66K64 600 aa19.94■□□□□ 0.78
SF3A1-209ENST00000496189 FAM151AQ8WW52 585 aa19.94■□□□□ 0.78
SF3A1-209ENST00000496189 AOC2O75106 756 aa19.93■□□□□ 0.78
SF3A1-209ENST00000496189 IDH1O75874 414 aaKnown RBP19.93■□□□□ 0.78
SF3A1-209ENST00000496189 SLC10A3P09131 477 aa19.93■□□□□ 0.78
SF3A1-209ENST00000496189 IRX6P78412 446 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-209ENST00000496189 MAP3K12Q12852 859 aa19.93■□□□□ 0.78
SF3A1-209ENST00000496189 TMED8Q6PL24 325 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-209ENST00000496189 MOB2Q70IA6 237 aa19.93■□□□□ 0.78
SF3A1-209ENST00000496189 REM2Q8IYK8 340 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-209ENST00000496189 RPAP1Q9BWH6 1393 aaPredicted RBP19.93■□□□□ 0.78
SF3A1-209ENST00000496189 GPR75-ASB3A0A0A6YYF3 556 aa19.92■□□□□ 0.78
SF3A1-209ENST00000496189 PLCG2P16885 1265 aa19.92■□□□□ 0.78
SF3A1-209ENST00000496189 MAP3K11Q16584 847 aa19.92■□□□□ 0.78
SF3A1-209ENST00000496189 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.92■□□□□ 0.78
SF3A1-209ENST00000496189 SLC10A4Q96EP9 437 aa19.92■□□□□ 0.78
SF3A1-209ENST00000496189 RWDD1Q9H446 243 aaPredicted RBP19.92■□□□□ 0.78
SF3A1-209ENST00000496189 MAST2Q6P0Q8 1798 aa19.92■□□□□ 0.78
SF3A1-209ENST00000496189 TCP10Q12799 353 aa19.91■□□□□ 0.78
SF3A1-209ENST00000496189 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
SF3A1-209ENST00000496189 CERS3Q8IU89 383 aa19.91■□□□□ 0.78
SF3A1-209ENST00000496189 ZSCAN29Q8IWY8 852 aaPredicted RBP19.91■□□□□ 0.78
SF3A1-209ENST00000496189 ANKRD13AQ8IZ07 590 aa19.91■□□□□ 0.78
SF3A1-209ENST00000496189 DNAJC2Q99543 621 aaKnown RBP19.91■□□□□ 0.78
SF3A1-209ENST00000496189 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.91■□□□□ 0.78
SF3A1-209ENST00000496189 THSD7BQ9C0I4 1608 aa19.91■□□□□ 0.78
SF3A1-209ENST00000496189 AKAP11Q9UKA4 1901 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 CA12O43570 354 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 ENTPD3O75355 529 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 RASAL3Q86YV0 1011 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 TEPSINQ96N21 525 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 IDI2Q9BXS1 227 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 WBP1LQ9NX94 342 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 CSADQ9Y600 493 aa19.9■□□□□ 0.78
SF3A1-209ENST00000496189 SSC5DA1L4H1 1573 aa19.89■□□□□ 0.77
SF3A1-209ENST00000496189 SMARCA5O60264 1052 aaPredicted RBP19.89■□□□□ 0.77
SF3A1-209ENST00000496189 RGS3P49796 1198 aa19.89■□□□□ 0.77
SF3A1-209ENST00000496189 PICALMQ13492 652 aa19.89■□□□□ 0.77
SF3A1-209ENST00000496189 LDLRAD1Q5T700 205 aa19.89■□□□□ 0.77
SF3A1-209ENST00000496189 GCC1Q96CN9 775 aa19.89■□□□□ 0.77
SF3A1-209ENST00000496189 PIH1D3Q9NQM4 214 aaKnown RBP19.89■□□□□ 0.77
SF3A1-209ENST00000496189 FAM155AB1AL88 458 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-209ENST00000496189 USP2O75604 605 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-209ENST00000496189 NEFLP07196 543 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 ATP5JP18859 108 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 CYP7A1P22680 504 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 NFIAQ12857 509 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 ZNF341Q9BYN7 854 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 FZD1Q9UP38 647 aa19.88■□□□□ 0.77
SF3A1-209ENST00000496189 AK9Q5TCS8 1911 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 GOLIM4O00461 696 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 CTCFP49711 727 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-209ENST00000496189 KIF23Q02241 960 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-209ENST00000496189 SREBF2Q12772 1141 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 CSRNP1Q96S65 589 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.87■□□□□ 0.77
SF3A1-209ENST00000496189 BOLA2Q9H3K6 86 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 ECHDC1Q9NTX5 307 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 AATFQ9NY61 560 aaKnown RBP eCLIP19.87■□□□□ 0.77
SF3A1-209ENST00000496189 FAM198AQ9UFP1 575 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 NDUFB9Q9Y6M9 179 aa19.87■□□□□ 0.77
SF3A1-209ENST00000496189 ZBTB48P10074 688 aaPredicted RBP19.86■□□□□ 0.77
SF3A1-209ENST00000496189 MAP3K9P80192 1104 aa19.86■□□□□ 0.77
SF3A1-209ENST00000496189 MAGEB6Q8N7X4 407 aa19.86■□□□□ 0.77
SF3A1-209ENST00000496189 ZNF384Q8TF68 577 aa19.86■□□□□ 0.77
SF3A1-209ENST00000496189 PAG1Q9NWQ8 432 aa19.86■□□□□ 0.77
SF3A1-209ENST00000496189 NPM3O75607 178 aaKnown RBP19.85■□□□□ 0.77
SF3A1-209ENST00000496189 ZSCAN25Q6NSZ9 544 aa19.85■□□□□ 0.77
SF3A1-209ENST00000496189 CDAN1Q8IWY9 1227 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms