RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 CUL9Q8IWT3 2517 aa18.04■□□□□ 0.48
GAPDH-210ENST00000496049 MYO3BQ8WXR4 1341 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 REC8O95072 547 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 PDE6AP16499 860 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 ADD2P35612 726 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 SLF2Q8IX21 1173 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 APPBP2Q92624 585 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 ZNF408Q9H9D4 720 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 HELLSQ9NRZ9 838 aa18.03■□□□□ 0.48
GAPDH-210ENST00000496049 ZNF646O15015 1829 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-210ENST00000496049 NMIQ13287 307 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-210ENST00000496049 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-210ENST00000496049 ESYT1Q9BSJ8 1104 aa18.02■□□□□ 0.48
GAPDH-210ENST00000496049 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
GAPDH-210ENST00000496049 SCN9AQ15858 1988 aa18.02■□□□□ 0.47
GAPDH-210ENST00000496049 COL4A5P29400 1685 aa18.02■□□□□ 0.47
GAPDH-210ENST00000496049 FXR1P51114 621 aaKnown RBP eCLIP18.01■□□□□ 0.47
GAPDH-210ENST00000496049 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
GAPDH-210ENST00000496049 ZMYM1Q5SVZ6 1142 aa18.01■□□□□ 0.47
GAPDH-210ENST00000496049 KIAA1211Q6ZU35 1233 aa18.01■□□□□ 0.47
GAPDH-210ENST00000496049 NOL10Q9BSC4 688 aaKnown RBP18.01■□□□□ 0.47
GAPDH-210ENST00000496049 HPS5Q9UPZ3 1129 aa18.01■□□□□ 0.47
GAPDH-210ENST00000496049 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 DLL1O00548 723 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 LDHCP07864 332 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 PRDX5P30044 214 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 SCNN1DP51172 638 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
GAPDH-210ENST00000496049 NOGQ13253 232 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 TNIP1Q15025 636 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 FAM227BQ96M60 508 aa18■□□□□ 0.47
GAPDH-210ENST00000496049 A0A0D9SFI3 127 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 YDJCA8MPS7 323 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 SGSM2O43147 1006 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 CYP7A1P22680 504 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 MECOMQ03112 1051 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 DACT2Q5SW24 774 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 CTU1Q7Z7A3 348 aaKnown RBP17.99■□□□□ 0.47
GAPDH-210ENST00000496049 HHIPL1Q96JK4 782 aa17.99■□□□□ 0.47
GAPDH-210ENST00000496049 CCDC171Q6TFL3 1326 aa17.98■□□□□ 0.47
GAPDH-210ENST00000496049 CERS3Q8IU89 383 aa17.98■□□□□ 0.47
GAPDH-210ENST00000496049 NSUN4Q96CB9 384 aaKnown RBP17.98■□□□□ 0.47
GAPDH-210ENST00000496049 GLIS2Q9BZE0 524 aaPredicted RBP17.98■□□□□ 0.47
GAPDH-210ENST00000496049 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
GAPDH-210ENST00000496049 TRIOBPQ9H2D6 2365 aa17.97■□□□□ 0.47
GAPDH-210ENST00000496049 TCRBV5S4A2TA0A5A2 114 aa17.97■□□□□ 0.47
GAPDH-210ENST00000496049 RAD17O75943 681 aa17.97■□□□□ 0.47
GAPDH-210ENST00000496049 RSBN1LQ6PCB5 846 aaPredicted RBP17.97■□□□□ 0.47
GAPDH-210ENST00000496049 USP50Q70EL3 339 aaPredicted RBP17.97■□□□□ 0.47
GAPDH-210ENST00000496049 TTF2Q9UNY4 1162 aaKnown RBP17.97■□□□□ 0.47
GAPDH-210ENST00000496049 MYH2Q9UKX2 1941 aa17.97■□□□□ 0.47
GAPDH-210ENST00000496049 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.47
GAPDH-210ENST00000496049 PSMD14O00487 310 aa17.96■□□□□ 0.47
GAPDH-210ENST00000496049 TRPA1O75762 1119 aa17.96■□□□□ 0.47
GAPDH-210ENST00000496049 HDAC9Q9UKV0 1011 aa17.96■□□□□ 0.47
GAPDH-210ENST00000496049 MROH7-TTC4A0A0A0MT08 1334 aa17.96■□□□□ 0.46
GAPDH-210ENST00000496049 F8W031 263 aaPredicted RBP17.95■□□□□ 0.46
GAPDH-210ENST00000496049 EPB41L2O43491 1005 aaKnown RBP17.95■□□□□ 0.46
GAPDH-210ENST00000496049 MBD4O95243 580 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 BAG3O95817 575 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 VIL1P09327 827 aaKnown RBP17.95■□□□□ 0.46
GAPDH-210ENST00000496049 GNAT2P19087 354 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 MCCP23508 829 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 RPS12P25398 132 aaKnown RBP17.95■□□□□ 0.46
GAPDH-210ENST00000496049 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 AGBL3Q8NEM8 1001 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 TEKT1Q969V4 418 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 KCNQ5Q9NR82 932 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 SAGE1Q9NXZ1 904 aa17.95■□□□□ 0.46
GAPDH-210ENST00000496049 M0R2C6 588 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 GPAA1O43292 621 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 PLCG2P16885 1265 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 MMP14P50281 582 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 CXCL9Q07325 125 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 KIAA0825Q8IV33 1275 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 OGFOD1Q8N543 542 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
GAPDH-210ENST00000496049 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
GAPDH-210ENST00000496049 CHGBP05060 677 aa17.93■□□□□ 0.46
GAPDH-210ENST00000496049 HUNKP57058 714 aa17.93■□□□□ 0.46
GAPDH-210ENST00000496049 HDLBPQ00341 1268 aaKnown RBP17.93■□□□□ 0.46
GAPDH-210ENST00000496049 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
GAPDH-210ENST00000496049 MIGA1Q8NAN2 632 aa17.93■□□□□ 0.46
GAPDH-210ENST00000496049 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
GAPDH-210ENST00000496049 RNF186Q9NXI6 227 aa17.93■□□□□ 0.46
GAPDH-210ENST00000496049 CEP290O15078 2479 aa17.93■□□□□ 0.46
GAPDH-210ENST00000496049 GAKO14976 1311 aa17.93■□□□□ 0.46
GAPDH-210ENST00000496049 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 GRIK5Q16478 980 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 SLFNL1Q499Z3 407 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 HHIPL2Q6UWX4 724 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 CCDC129Q6ZRS4 1044 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 DDRGK1Q96HY6 314 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 NACAP1Q9BZK3 213 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 SERPINA10Q9UK55 444 aa17.92■□□□□ 0.46
GAPDH-210ENST00000496049 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
GAPDH-210ENST00000496049 MKI67P46013 3256 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms