RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 FCGRTP55899 365 aa12.49□□□□□ -0.41
SMARCAL1-213ENST00000496037 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
SMARCAL1-213ENST00000496037 SNAPC2Q13487 334 aa12.49□□□□□ -0.41
SMARCAL1-213ENST00000496037 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
SMARCAL1-213ENST00000496037 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
SMARCAL1-213ENST00000496037 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 F8W031 263 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 TNFRSF10AO00220 468 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 PDE8AO60658 829 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 INHAP05111 366 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 RBM5P52756 815 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 PCDHAC2Q9Y5I4 1007 aa12.48□□□□□ -0.41
SMARCAL1-213ENST00000496037 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 ADCY3O60266 1144 aa12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 NFE2L2Q16236 605 aa12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 DIS3LQ8TF46 1054 aaKnown RBP12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 PRMT6Q96LA8 375 aaPredicted RBP12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
SMARCAL1-213ENST00000496037 TTC28Q96AY4 2481 aa12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 TXNRD3Q86VQ6 643 aa12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 ERO1BQ86YB8 467 aa12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 ANKLE1Q8NAG6 615 aa12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 BSDC1Q9NW68 430 aaPredicted RBP12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 LEMD3Q9Y2U8 911 aa12.46□□□□□ -0.41
SMARCAL1-213ENST00000496037 ALPK3Q96L96 1907 aa12.46□□□□□ -0.42
SMARCAL1-213ENST00000496037 IRF6O14896 467 aa12.45□□□□□ -0.42
SMARCAL1-213ENST00000496037 ELNP15502 786 aa12.45□□□□□ -0.42
SMARCAL1-213ENST00000496037 KCNJ4P48050 445 aa12.45□□□□□ -0.42
SMARCAL1-213ENST00000496037 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
SMARCAL1-213ENST00000496037 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
SMARCAL1-213ENST00000496037 CDH23Q9H251 3354 aa12.45□□□□□ -0.42
SMARCAL1-213ENST00000496037 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 PDHXO00330 501 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 TNNI2P48788 182 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 PPIL2Q13356 520 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 TJAP1Q5JTD0 557 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 CERS5Q8N5B7 392 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 PARK7Q99497 189 aaKnown RBP12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 GABRQQ9UN88 632 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
SMARCAL1-213ENST00000496037 AOX1Q06278 1338 aa12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 KLRK1P26718 216 aa12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 RIC3Q7Z5B4 369 aa12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 WRNIP1Q96S55 665 aa12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 CD209Q9NNX6 404 aa12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 DBF4Q9UBU7 674 aaPredicted RBP12.43□□□□□ -0.42
SMARCAL1-213ENST00000496037 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 FLT3LGP49771 235 aa12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 CTSWP56202 376 aa12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 CDAN1Q8IWY9 1227 aa12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 TEPSINQ96N21 525 aa12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 ANKRD2Q9GZV1 360 aa12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 C11orf49Q9H6J7 331 aa12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
SMARCAL1-213ENST00000496037 TCP10L2B9ZVM9 353 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 FOSL2P15408 326 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 MAP3K12Q12852 859 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 CCDC191Q8NCU4 936 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 JARID2Q92833 1246 aaPredicted RBP12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 MYD88Q99836 296 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 TMEM39BQ9GZU3 492 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
SMARCAL1-213ENST00000496037 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 BCRP11274 1271 aa12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 FKBP1AP62942 108 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 PPATQ06203 517 aa12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 IRF5Q13568 498 aa12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 MYLIPQ8WY64 445 aa12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 ZKSCAN4Q969J2 545 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 GREM2Q9H772 168 aa12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 TDRD3Q9H7E2 651 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-213ENST00000496037 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.43
SMARCAL1-213ENST00000496037 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
SMARCAL1-213ENST00000496037 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
SMARCAL1-213ENST00000496037 HOOK2Q96ED9 719 aa12.39□□□□□ -0.43
SMARCAL1-213ENST00000496037 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-213ENST00000496037 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
SMARCAL1-213ENST00000496037 DDX60LQ5H9U9 1706 aaKnown RBP12.38□□□□□ -0.43
SMARCAL1-213ENST00000496037 ZNF804AQ7Z570 1209 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms