RNA–Protein interactions for RNA: ENST00000495571.5

VWA3B-220, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-220ENST00000495571 ZC3H12AQ5D1E8 599 aaKnown RBP9.78□□□□□ -0.84
VWA3B-220ENST00000495571 VSTM4Q8IW00 320 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 CDK19Q9BWU1 502 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 ITSN1Q15811 1721 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.78□□□□□ -0.84
VWA3B-220ENST00000495571 ZSCAN12O43309 604 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 SHOX2O60902 331 aaPredicted RBP9.78□□□□□ -0.84
VWA3B-220ENST00000495571 CSB-PGBD3P0DP91 1061 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 TOP1P11387 765 aaKnown RBP9.78□□□□□ -0.84
VWA3B-220ENST00000495571 NF2P35240 595 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 GRIK3Q13003 919 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 ZNF569Q5MCW4 686 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
VWA3B-220ENST00000495571 ZBTB10Q96DT7 871 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 IRAK4Q9NWZ3 460 aa9.78□□□□□ -0.84
VWA3B-220ENST00000495571 NSD2O96028 1365 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 ENO4A6NNW6 628 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 PDCP20941 246 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 IL13P35225 146 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 GNGT1P63211 74 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 AKAP17AQ02040 695 aaKnown RBP9.77□□□□□ -0.84
VWA3B-220ENST00000495571 PDE4BQ07343 736 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.84
VWA3B-220ENST00000495571 ACCSLQ4AC99 568 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 RHPN1Q8TCX5 695 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.84
VWA3B-220ENST00000495571 CLIC4Q9Y696 253 aa9.77□□□□□ -0.84
VWA3B-220ENST00000495571 MPHOSPH10O00566 681 aaKnown RBP9.77□□□□□ -0.85
VWA3B-220ENST00000495571 OPLAHO14841 1288 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 CTAGE5O15320 804 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 ARHGAP6O43182 974 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 TUBB4AP04350 444 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 MYBL1P10243 752 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 HSP90B1P14625 803 aaKnown RBP9.77□□□□□ -0.85
VWA3B-220ENST00000495571 DDR1Q08345 913 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 SLC35F6Q8N357 371 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
VWA3B-220ENST00000495571 NCOA5Q9HCD5 579 aaKnown RBP9.77□□□□□ -0.85
VWA3B-220ENST00000495571 HDAC6Q9UBN7 1215 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 CDC23Q9UJX2 597 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 TFR2Q9UP52 801 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 KIF1AQ12756 1690 aa9.77□□□□□ -0.85
VWA3B-220ENST00000495571 CTDNEP1O95476 244 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 CLNS1AP54105 237 aaKnown RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 PDCLQ13371 301 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 CPLX3Q8WVH0 158 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 STAG1Q8WVM7 1258 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 A1CFQ9NQ94 594 aaKnown RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 FOXO3O43524 673 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 MYO1BO43795 1136 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 SRGAP2O75044 1071 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 RPS6KB1P23443 525 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 KIF4BQ2VIQ3 1234 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 ZNF589Q86UQ0 364 aaPredicted RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 CNTROBQ8N137 903 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 RRP36Q96EU6 259 aaKnown RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 TM6SF1Q9BZW5 370 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 KLC4Q9NSK0 619 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 TERF2IPQ9NYB0 399 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 RTEL1Q9NZ71 1219 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 ANKARQ7Z5J8 1434 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 ZNF335Q9H4Z2 1342 aaPredicted RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 EIF4E1BA6NMX2 242 aaKnown RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 ERLIN1O75477 346 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 CCT2P78371 535 aaKnown RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 WLSQ5T9L3 541 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 BLOC1S2Q6QNY1 142 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 NME9Q86XW9 330 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 SH2D3CQ8N5H7 860 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 TEX13AQ9BXU3 409 aaPredicted RBP9.76□□□□□ -0.85
VWA3B-220ENST00000495571 NBPF3Q9H094 633 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 TRIM10Q9UDY6 481 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 CFAP45Q9UL16 551 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 RPS6KL1Q9Y6S9 549 aa9.76□□□□□ -0.85
VWA3B-220ENST00000495571 ANKRD33BA6NCL7 494 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 CHL1O00533 1208 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 ENC1O14682 589 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 CHUKO15111 745 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 NRDCO43847 1150 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
VWA3B-220ENST00000495571 AARSP49588 968 aaKnown RBP eCLIP9.75□□□□□ -0.85
VWA3B-220ENST00000495571 ATP1A2P50993 1020 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
VWA3B-220ENST00000495571 NAA25Q14CX7 972 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 ACRBPQ8NEB7 543 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
VWA3B-220ENST00000495571 PUS7Q96PZ0 661 aaKnown RBP9.75□□□□□ -0.85
VWA3B-220ENST00000495571 PICK1Q9NRD5 415 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 A0A0G2JLW4 131 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 FOXN1O15353 648 aa9.75□□□□□ -0.85
VWA3B-220ENST00000495571 EIF3HO15372 352 aaKnown RBP eCLIP9.75□□□□□ -0.85
VWA3B-220ENST00000495571 CCP110O43303 1012 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms