RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 FAM205AQ6ZU69 1335 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 ZNF213O14771 459 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 DDIT3P35638 169 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 AK2P54819 239 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 TRDNQ13061 729 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 RAB3GAP1Q15042 981 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 TTLL5Q6EMB2 1281 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
HDAC3-214ENST00000495485 OSBP2Q969R2 916 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.46
HDAC3-214ENST00000495485 HACL1Q9UJ83 578 aa12.15□□□□□ -0.46
HDAC3-214ENST00000495485 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 H7C1D1 291 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 GPAA1O43292 621 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 APPP05067 770 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 PDE6AP16499 860 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-214ENST00000495485 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-214ENST00000495485 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
HDAC3-214ENST00000495485 ZNF646O15015 1829 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-214ENST00000495485 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 M0R2C6 588 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 PSMD14O00487 310 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-214ENST00000495485 CYP21A2P08686 494 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 ALX1Q15699 326 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
HDAC3-214ENST00000495485 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
HDAC3-214ENST00000495485 TXNRD3Q86VQ6 643 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 MAGEB6Q8N7X4 407 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
HDAC3-214ENST00000495485 PIH1D3Q9NQM4 214 aaKnown RBP12.13□□□□□ -0.47
HDAC3-214ENST00000495485 ADARB2Q9NS39 739 aaKnown RBP12.13□□□□□ -0.47
HDAC3-214ENST00000495485 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
HDAC3-214ENST00000495485 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
HDAC3-214ENST00000495485 RAD17O75943 681 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 GYG1P46976 350 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
HDAC3-214ENST00000495485 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-214ENST00000495485 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
HDAC3-214ENST00000495485 SLC51AQ86UW1 340 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 MRIQ9BWK5 157 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
HDAC3-214ENST00000495485 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
HDAC3-214ENST00000495485 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 TOMM70O94826 608 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 FGAP02671 866 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 PDCP20941 246 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 MCM4P33991 863 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 GMPSP49915 693 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-214ENST00000495485 SCNN1DP51172 638 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 ZNF280AP59817 542 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-214ENST00000495485 GSTO1P78417 241 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
HDAC3-214ENST00000495485 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-214ENST00000495485 GMLQ99445 158 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
HDAC3-214ENST00000495485 NAPBQ9H115 298 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 ATP6V1DQ9Y5K8 247 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
HDAC3-214ENST00000495485 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
HDAC3-214ENST00000495485 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 TCRBV5S4A2TA0A5A2 114 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 E7EWF7 191 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 SNAP23O00161 211 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 LDHCP07864 332 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 CYP7A1P22680 504 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 KLRK1P26718 216 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 MCM5P33992 734 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 EPHX2P34913 555 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 GTF2IP78347 998 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 FSTL1Q12841 308 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 NAA16Q6N069 864 aaPredicted RBP12.1□□□□□ -0.47
HDAC3-214ENST00000495485 LDHDQ86WU2 507 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 SLF2Q8IX21 1173 aa12.1□□□□□ -0.47
HDAC3-214ENST00000495485 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
HDAC3-214ENST00000495485 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms