RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 VGLL4Q14135 290 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 PI16Q6UXB8 463 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 OPTNQ96CV9 577 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 AKAP11Q9UKA4 1901 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
RPRD1B-206ENST00000495457 PDS5AQ29RF7 1337 aaKnown RBP17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 CCDC85CA6NKD9 419 aa17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 IGF2BP3O00425 579 aaKnown RBP eCLIP17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 IFNL1Q8IU54 200 aa17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 ZGPATQ8N5A5 531 aaKnown RBP17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 ZNF296Q8WUU4 475 aaPredicted RBP17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 USP40Q9NVE5 1235 aa17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
RPRD1B-206ENST00000495457 GPR25O00155 361 aa17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 INHBEP58166 350 aa17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 MIGA2Q7L4E1 593 aa17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 FAM151AQ8WW52 585 aa17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 FAM198AQ9UFP1 575 aa17.58■□□□□ 0.4
RPRD1B-206ENST00000495457 OTOFQ9HC10 1997 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 GAKO14976 1311 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 ZFPM1Q8IX07 1006 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 CFHR5Q9BXR6 569 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 CSADQ9Y600 493 aa17.57■□□□□ 0.4
RPRD1B-206ENST00000495457 ALDH1A1P00352 501 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 MCAMP43121 646 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 MECOMQ03112 1051 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 TNNI3KQ59H18 835 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 CTU1Q7Z7A3 348 aaKnown RBP17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 ZNF384Q8TF68 577 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 OTUD5Q96G74 571 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 PTPN18Q99952 460 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 DBNDD2Q9BQY9 259 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 SNCAIPQ9Y6H5 919 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 FPGT-TNNI3KV9GXZ4 949 aa17.56■□□□□ 0.4
RPRD1B-206ENST00000495457 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 BTDP43251 543 aa17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 ERICH6Q7L0X2 663 aa17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 HOOK2Q96ED9 719 aa17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 MS4A4AQ96JQ5 239 aa17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 GPR108Q9NPR9 543 aa17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
RPRD1B-206ENST00000495457 SPDYE5A6NIY4 337 aa17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 INPP5BP32019 993 aa17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 RGS3P49796 1198 aa17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 NOM1Q5C9Z4 860 aaKnown RBP17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 DCAF15Q66K64 600 aa17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 FAM163AQ96GL9 167 aaPredicted RBP17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
RPRD1B-206ENST00000495457 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 FKTNO75072 461 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 TTC39AQ5SRH9 613 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 SLF2Q8IX21 1173 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 BRI3BPQ8WY22 251 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 SNRKQ9NRH2 765 aa17.53■□□□□ 0.4
RPRD1B-206ENST00000495457 CCL15-CCL14A0A0B4J2E2 113 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 WDHD1O75717 1129 aaPredicted RBP17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 CRHR2Q13324 411 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 CCL15Q16663 113 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 SH3BP5LQ7L8J4 393 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 ERO1BQ86YB8 467 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 NSUN4Q96CB9 384 aaKnown RBP17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 CCDC8Q9H0W5 538 aaPredicted RBP17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 DDX4Q9NQI0 724 aaKnown RBP17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 DBNLQ9UJU6 430 aaKnown RBP17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
RPRD1B-206ENST00000495457 GPR75-ASB3A0A0A6YYF3 556 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 ENTPD3O75355 529 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 SLURP2P0DP57 97 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 MS4A1P11836 297 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 GTF2A2P52657 109 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 RHBDL3P58872 404 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 PICALMQ13492 652 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 ZNF112Q9UJU3 913 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 EXOC6BQ9Y2D4 811 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 ATRNL1Q5VV63 1379 aa17.51■□□□□ 0.39
RPRD1B-206ENST00000495457 IRF6O14896 467 aa17.5■□□□□ 0.39
RPRD1B-206ENST00000495457 LRP2BPQ9P2M1 347 aa17.5■□□□□ 0.39
RPRD1B-206ENST00000495457 LAMB1P07942 1786 aa17.5■□□□□ 0.39
RPRD1B-206ENST00000495457 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms